Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02608 ATGACTTGGAAGGTTGTGACATACATATCCTGGAAAATGAATTTTGACATTTGCAACTACATTCATTATGATGTGACTTCATCATTCCCCCACCTTGGACATTCAGGCATAGTTGAAGCTGCACGAGAGCTTTTTATGCAGATTGAAGGAAATCCTGAAAGGCCTGGTAAGAAATACTTCAGAAGAAATGGTACAGAGGATCTGTACCATTTGATTAAGAAGGCAGTTTCAATTAGGAAGCATCTGGAGAGGAACAGAAAGGACAAGGACTCCAAGTTTAGGTTGATTCTCGTGGAGAGCAGAATCCACCGTCTTCGGAAATGGTATGAATTTGTACCTTAA 342 0.4035 MTWKVVTYISWKMNFDICNYIHYDVTSSFPHLGHSGIVEAARELFMQIEGNPERPGKKYFRRNGTEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLRKWYEFVP* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02608 113 FunFam 40S ribosomal protein S13 64 112 - -
Phac7g02608 113 SUPERFAMILY S15/NS1 RNA-binding domain 65 109 IPR009068 -
Phac7g02608 113 CDD Ribosomal_S15p_S13e 66 109 IPR000589 GO:0003735|GO:0005840|GO:0006412
Phac7g02608 113 PANTHER RIBOSOMAL PROTEIN S15P/S13E 65 110 IPR023029 -
Phac7g02608 113 Pfam Ribosomal protein S15 66 109 IPR000589 GO:0003735|GO:0005840|GO:0006412
Phac7g02608 113 Gene3D - 64 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02608 Phac-Chr7 30109134 30110090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02608 66 110 Cytoplasmic Ribosomal Protein Gene Family AT3G60770 88.889 2.68e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02608 K02953 - cmo:127148653 85.8853