Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02587 ATGAGTGCTTATCCCAATCAAAAACACAGGACATGCGACTATTGTGGAGACTTCAAAGCTCTTCTATATTGCAGAGCTGATTCTGCAAAATTATGTTTCTTATGTGACCGCAAAATTCACTTCCCTAACCAGCTTTTTTCCAAGCACTCGCGCACTCACCTCTGTGATGGGTGTGGTGATTCCCCTGCATCAGTCCTCTGTTATGCTGAGAACTCTGTTTTCTGCCACAACTGTGACTGCCAAAGCCATAACAACCGCATGCTGTCTCAGGAACACCAACGGAGACCCCTTGAGGGGTTCTCTGGGTGCCCTTCTGTCACTCAGATGTTAATGATTTTGGGTCTTACTGAAAAATCTCTGCTTTCAACCGAGGGGGGAAGTTCCCATGATGATGGCCTTTCCGAATTGCACGTGTGGAATGCTCCTTCTGTTTTTGGTTTTGAGGATTTGATTGCTTCCTCTTCTTATAAGAATCATAAGGGTGCGTGCGGGAGACAGAAAGAAGAAATTCTGAGTCAGCTTCGTGAACTAATAAAGTTGGAGCCTGACTTGACTCATGGAGAAGTAGATGCTGAACCACAACTGCAATTTGAAAACTTGTCTACTGGTTTTGAACGTGACATAGAGGCTAACATGTTTCCTTCATATGAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGATCGTGCAAATCAAATTGTTCCTTCTGATACGTCAGTGAGTGATTATAGCGAGCTAGCTTCAGCTAAAGATCCAACTTTTACAATCCCTGCAACTCACACGTATTGTAACAACCAAGGAAAACCATCACATTATTTGAAGGCTGAAAACTTGTCTCCTACTCCTAAAGCTACTACTCCTTATGAGTTAACAAGTCATGAAAGAGATTCAGCATTATTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGACAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGGCTGAGAGTTAAGGGTCGGTTTGTGAAAGATGAAACACAGAAATAA 1029 0.4295 MSAYPNQKHRTCDYCGDFKALLYCRADSAKLCFLCDRKIHFPNQLFSKHSRTHLCDGCGDSPASVLCYAENSVFCHNCDCQSHNNRMLSQEHQRRPLEGFSGCPSVTQMLMILGLTEKSLLSTEGGSSHDDGLSELHVWNAPSVFGFEDLIASSSYKNHKGACGRQKEEILSQLRELIKLEPDLTHGEVDAEPQLQFENLSTGFERDIEANMFPSYEAGVFCWHGESSDRANQIVPSDTSVSDYSELASAKDPTFTIPATHTYCNNQGKPSHYLKAENLSPTPKATTPYELTSHERDSALLRYREKKKTRRYDKHIRYESRKVRAESRLRVKGRFVKDETQK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02587 342 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Phac7g02587 342 Pfam CCT motif 296 338 IPR010402 GO:0005515
Phac7g02587 342 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 338 - -
Phac7g02587 342 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Phac7g02587 342 ProSiteProfiles CCT domain profile. 296 338 IPR010402 GO:0005515
Phac7g02587 342 CDD Bbox1_BBX-like 12 54 - -
Phac7g02587 342 SMART bboxneu5 7 54 IPR000315 GO:0008270
Phac7g02587 342 SMART bboxneu5 55 97 IPR000315 GO:0008270
Phac7g02587 342 CDD Bbox1_BBX-like 54 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02587 Phac-Chr7 29921552 29924729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02587 7 311 C2C2-CO-like Transcription Factor Family AT2G47890 35.625 1.33e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac7g02587 CCT 1.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02587 - - vun:114189938 587.8