Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02562 ATGTCAAATATTTCAGGTGATGAAGGAAGTTTGTCCTCAGCAAACACTGTGGAAGAAGTTCATCAAGAAAGCGAGGAGCAGCAACCTCAAAACCGGCATGGCTCAAGGTCTGGTGCTTGCAACACCAATAGCTCAACTTATCAACAGCAGCAGCAACAGTCAACCAAGAAGAAAAGAAACCTACCTGGAACCCCAGATCCGAATGCTGAAGTTATTGCTTTATCACCAACCACATTAATGGCAACAAATAGATTCGTTTGTGAGATCTGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTGCACCGCAGAGGTCACAATCTTCCATGGAAACTGAGGCAAAGACCAAGCAATGAGGTGAAGAAACGGGTTTATGTGTGCCCTGAGCCCTCATGCGTCCACCACAACCCAGCTCGAGCATTAGGAGACCTCACTGGCATAAAAAAGCATTACAGCAGAAAACATGGTGAAAAGAAATGGAAATGTGACAAGTGCTCTAAAAGATATGCAGTCCAATCTGATTGGAAGGCACACCAGAAAACCTGTGGCACCAGGGAATACAAATGTGATTGTGGGACCATATTTGCCAGAAGAGACAGCTTTATCACACACAGGGCCTTTTGTGACGCATTAACCGAAGAAAACAATCGAGTAAACCCTTCATTAACCACTGGGGCTAGCATGACACCAAGCTTGCAAAATGAACTGCAGGATCTCATGGCCACAATGCCTCTAAGCACTAGTCCCAACAACGCAGTACCCGAATTCAACAACAACTACGACCCTAGTAAGAGCCCACTCAAAACCCTATCCCAACAACATCTTGTCCCAATGCCATTCAAGTCCATGAGCATGAGGGGTTGCATGTCCTCTACCACTTCAGGTACACTCTTTGGTGGTCCAAAAAATGTGTCACTTCCCTCATCCTCCACCCTTCAACTCAGCACCAACAACTCACATACCTTCAATTACTTCCAAGACAGCAAAAACGCTGCTGCATCAGCTCACATGTCTGCCACAGCTTTATTGCAGAAAGCAGCCCAAATGGGTGCTGCTGCAACCAATAATAGCATTAACTCTCCCACCATGATGCAGAAAAGCTTTGTTAGTGGCATGACTGGTCCTGACCCCAACCATAATCCTTCTTCCTATGACCCCTTCCATCCTCCACACTCTGATGATCAATCTCACATGGCTGGGATTAGTGGTGCTGGAGCCTTCACCAACCAATTTTTTTACAAGGGGCAACAAGAGATATCAGTAATACTTGATTCCAACACTAGTGATATGGGAATTTTCGGTGCAATGTTCATGGGAAATGAGCACAACCAAGGCGTGATGAAGAACGTGGAGCAAGAGGTTGGTGCTAATAGTTCAGGTTTGATTCATAGAAGAGATGTATCAGAAGGAAATCCAATGGGGGATTCAAGGTTTGGAGGTGGTGACATGACAAGGGTCCATGATTTCTTGGGTGTTGGGGGTGCAACTTCAAGGGCAGGAAGTTTGCATGAAGCACAGAAACAACAACAGCAAAGTTTGGAGTTAGAGGCATTAACCCACCAGAGGTTACAAATGATTAATCACTTTCACCACCACCTTCCACATGGGGATTCTGCTATGGAGAAGTCCATTTGGGACATTTGA 1647 0.4554 MSNISGDEGSLSSANTVEEVHQESEEQQPQNRHGSRSGACNTNSSTYQQQQQQSTKKKRNLPGTPDPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRPSNEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFARRDSFITHRAFCDALTEENNRVNPSLTTGASMTPSLQNELQDLMATMPLSTSPNNAVPEFNNNYDPSKSPLKTLSQQHLVPMPFKSMSMRGCMSSTTSGTLFGGPKNVSLPSSSTLQLSTNNSHTFNYFQDSKNAAASAHMSATALLQKAAQMGAAATNNSINSPTMMQKSFVSGMTGPDPNHNPSSYDPFHPPHSDDQSHMAGISGAGAFTNQFFYKGQQEISVILDSNTSDMGIFGAMFMGNEHNQGVMKNVEQEVGANSSGLIHRRDVSEGNPMGDSRFGGGDMTRVHDFLGVGGATSRAGSLHEAQKQQQQSLELEALTHQRLQMINHFHHHLPHGDSAMEKSIWDI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02562 548 MobiDBLite consensus disorder prediction 31 61 - -
Phac7g02562 548 SMART c2h2final6 126 156 IPR013087 -
Phac7g02562 548 SMART c2h2final6 85 107 IPR013087 -
Phac7g02562 548 SMART c2h2final6 161 181 IPR013087 -
Phac7g02562 548 Gene3D Classic Zinc Finger 61 130 - -
Phac7g02562 548 FunFam protein indeterminate-domain 5, chloroplastic-like 139 218 - -
Phac7g02562 548 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Phac7g02562 548 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 107 IPR013087 -
Phac7g02562 548 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 512 IPR031140 -
Phac7g02562 548 MobiDBLite consensus disorder prediction 1 70 - -
Phac7g02562 548 FunFam protein indeterminate-domain 12-like 64 132 - -
Phac7g02562 548 MobiDBLite consensus disorder prediction 373 401 - -
Phac7g02562 548 MobiDBLite consensus disorder prediction 1 18 - -
Phac7g02562 548 Pfam Zinc-finger of C2H2 type 85 107 - -
Phac7g02562 548 Gene3D Classic Zinc Finger 140 219 - -
Phac7g02562 548 SUPERFAMILY beta-beta-alpha zinc fingers 84 182 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02562 Phac-Chr7 29697269 29700767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02562 56 359 IDZ Gene Family AT3G50700 56.522 4.25e-114 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02562 zf-C2H2 0.0056 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02562 - - gmx:100797943 764.222