Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02560 ATGGGTGACAACATCAACATTGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTACAACTTCACATCTTCAACTGCAACTGCAAGTGACACCTCTGAACAAGATGGGGTCATTAAGGAGCAGGATCGGTTGCTTCCAATAGCTAATGTGGGGAGAATCATGAAGCAAACTCTTCCTCCCAATGCCAAGATCTCAAAAGAAGCTAGAGAAACCATGCAGGAATGTGTGTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAAACCGTGAATGGTGACGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTACGCTGAGCCTCTTAAAAGGTACTTGCATAAGTATAGGGAGCTGGAGGGTGAGAGAGCAAACCAAAATAAGGGTAACAGTTATGAAAATAACAACATCTCAAACATATAA 453 0.4393 MGDNINIGKVLDREGFKYNFTSSTATASDTSEQDGVIKEQDRLLPIANVGRIMKQTLPPNAKISKEARETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHKYRELEGERANQNKGNSYENNNISNI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02560 150 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Phac7g02560 150 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Phac7g02560 150 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Phac7g02560 150 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Phac7g02560 150 SUPERFAMILY Histone-fold 40 141 IPR009072 GO:0046982
Phac7g02560 150 Gene3D Histone, subunit A 30 149 IPR009072 GO:0046982
Phac7g02560 150 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 137 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac7g02560 150 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac7g02560 150 FunFam Nuclear transcription factor Y subunit B-3 32 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02560 Phac-Chr7 29646388 29647812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02560 18 137 CCAAT-HAP3 Transcription Factor Family AT2G47810 68.657 2.77e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac7g02560 CBFD_NFYB_HMF 9.5e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02560 K08065 - gmx:100817274 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02560 7 29646388 29647812 Phac7g02560 7 29646388 29647812 ECH