Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02559 ATGGGTGACAACATCAACATTGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTACAACTTCACATCTTCAACTGCAACTGCAAGTGACACCTCTGAACAAGATGGGGTCATTAAGGAGCAGGATCGGTTGCTTCCAATAGCTAATGTGGGGAGAATCATGAAGCAAACTCTTCCTCCCAATGCCAAGATCTCAAAAGAAGCTAGAGAAACCATGCAGGAATGTGTGTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAAACCGTGAATGGTGACGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTACGCTGAGCCTCTTAAAAGATATTCAAGGTGCTTCTATCCTTATTTGGTATATATGTATGAGTGGTTCAGATACTCACTTCCTACACTTGGAGTGAATTTGGAGAGCTATGGGAGCATGAGAGAGCCAAAAGGATATAACTAA 486 0.4383 MGDNINIGKVLDREGFKYNFTSSTATASDTSEQDGVIKEQDRLLPIANVGRIMKQTLPPNAKISKEARETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYSRCFYPYLVYMYEWFRYSLPTLGVNLESYGSMREPKGYN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02559 161 SUPERFAMILY Histone-fold 40 123 IPR009072 GO:0046982
Phac7g02559 161 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac7g02559 161 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Phac7g02559 161 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Phac7g02559 161 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Phac7g02559 161 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Phac7g02559 161 Gene3D Histone, subunit A 31 127 IPR009072 GO:0046982
Phac7g02559 161 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 122 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02559 Phac-Chr7 29646388 29647812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02559 18 122 CCAAT-HAP3 Transcription Factor Family AT2G47810 69.748 7.60e-55 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac7g02559 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02559 K08065 - gmx:100817274 219.55