Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02558 ATGGGTGACAACATCAACATTGGCAAAGTCTTAGACAGAGAAGGCTTTAAGTACAACTTCACATCTTCAACTGCAACTGCAAGTGACACCTCTGAACAAGATGGGGTCATTAAGGAGCAGGATCGGTTGCTTCCAATAGCTAATGTGGGGAGAATCATGAAGCAAACTCTTCCTCCCAATGCCAAGATCTCAAAAGAAGCTAGAGAAACCATGCAGGAATGTGTGTCCGAGTTCATTAGCTTTGTCACTGGGGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAAACCGTGAATGGTGACGATATTTGCTGGGCCTTGGCTACCCTAGGGTTTGATGACTACGCTGAGCCTCTTAAAAGATATTCAAGGTGCTTCTATCCTTATTTGGTATATATGTATGAGGTGAGTCGTATAAGCGTAGACGTGTTTTAG 435 0.4414 MGDNINIGKVLDREGFKYNFTSSTATASDTSEQDGVIKEQDRLLPIANVGRIMKQTLPPNAKISKEARETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYSRCFYPYLVYMYEVSRISVDVF* 145
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02558 144 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 122 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac7g02558 144 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Phac7g02558 144 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac7g02558 144 Gene3D Histone, subunit A 31 127 IPR009072 GO:0046982
Phac7g02558 144 SUPERFAMILY Histone-fold 40 123 IPR009072 GO:0046982
Phac7g02558 144 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Phac7g02558 144 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Phac7g02558 144 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac7g02558 Phac-Chr7 29646388 29647812 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02558 18 122 CCAAT-HAP3 Transcription Factor Family AT2G47810 69.748 2.06e-55 169
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac7g02558 CBFD_NFYB_HMF 8.7e-28 CL0012
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02558 K08065 - gmx:100817274 219.55