Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02536 ATGGCCGATGCTCCCGCGAGTCCAGGCGGCGGAGGTAGCCACGAGAGCGGCGAGCACAGTCCCCGCTCCAATTTCCGCGAGCAGGACCGCTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGAAAGCGCTTCCCGCCAACGGCAAAATCGCCAAGGACGCCAAAGAAACCGTGCAAGAATGTGTATCCGAGTTCATCAGCTTCATCACCAGCGAAGCTAGCGATAAGTGCCAGAGAGAGAAGAGAAAGACCATTAACGGCGACGATTTACTTTGGGCTATGGCCACTTTAGGTTTCGAGGAATATGTTGATCCGCTTAAGATTTACCTCGCCTCTTACAGAGAGATTGAGGGTGATTCAAAGGGTTCGGCCAAGGGTGGAGAGACATCTTCTAAGAGAGATGTTTATCCCAATCCTAATGTCCAGGTGGAGAATCTTGCTCATCAAGGTTCTTTCTCACAAGGTGTTAACTACACGAATTCTCAGCCCCAGGGTCCACATATGATAGTTCCGATGCAAGGCCAAGAGTAG 534 0.5169 MADAPASPGGGGSHESGEHSPRSNFREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYVDPLKIYLASYREIEGDSKGSAKGGETSSKRDVYPNPNVQVENLAHQGSFSQGVNYTNSQPQGPHMIVPMQGQE* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02536 177 MobiDBLite consensus disorder prediction 134 169 - -
Phac7g02536 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Phac7g02536 177 Gene3D Histone, subunit A 18 152 IPR009072 GO:0046982
Phac7g02536 177 SUPERFAMILY Histone-fold 28 131 IPR009072 GO:0046982
Phac7g02536 177 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 149 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac7g02536 177 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac7g02536 177 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Phac7g02536 177 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Phac7g02536 177 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Phac7g02536 177 MobiDBLite consensus disorder prediction 1 28 - -
Phac7g02536 177 MobiDBLite consensus disorder prediction 119 177 - -
Phac7g02536 177 FunFam Nuclear transcription factor Y subunit B-3 20 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02536 Phac-Chr7 29439946 29442895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02536 1 177 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.111 6.93e-85 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac7g02536 CBFD_NFYB_HMF 8.3e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02536 K08065 - gmx:100798667 290.041