Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Phac7g02534
ATGGCCGATGCTCCCGCGAGTCCAGGCGGCGGAGGTAGCCACGAGAGCGGCGAGCACAGTCCCCGCTCCAATTTCCGCGAGCAGGACCGCTTCCTCCCCATCGCCAACATCAGCCGCATCATGAAGAAAGCGCTTCCCGCCAACGGCAAAATCGCCAAGGACGCCAAAGAAACCGTGCAAGAATGTGTATCCGAGTTCATCAGCTTCATCACCAGCGAAGCTAGCGATAAGTGCCAGAGAGAGAAGAGAAAGACCATTAACGGCGACGATTTACTTTGGGCTATGGCCACTTTAGGTTTCGAGGAATATGTTGATCCGCTTAAGATTTACCTCGCCTCTTACAGAGAGATTGAGGGTGATTCAAAGGGTTCGGCCAAGGGTGGAGAGACATCTTCTAAGAGAGATGTTTATCCCAATCCTAATGTCCAGGTGGAGAATCTTGCTCATCAAGGTTCTTTCTCACAAGGTGTTAACTACACGAATTCTCAGCCCCAGGGTCCACATATGATAGTTCCGATGCAAGGCCAAGAGTAG
534
0.5169
MADAPASPGGGGSHESGEHSPRSNFREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYVDPLKIYLASYREIEGDSKGSAKGGETSSKRDVYPNPNVQVENLAHQGSFSQGVNYTNSQPQGPHMIVPMQGQE*
178
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Phac7g02534
177
MobiDBLite
consensus disorder prediction
134
169
-
-
Phac7g02534
177
Pfam
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
31
95
IPR003958
-
Phac7g02534
177
Gene3D
Histone, subunit A
18
152
IPR009072
GO:0046982
Phac7g02534
177
SUPERFAMILY
Histone-fold
28
131
IPR009072
GO:0046982
Phac7g02534
177
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
16
149
IPR027113
GO:0001228|GO:0006355|GO:0016602
Phac7g02534
177
ProSitePatterns
NF-YB/HAP3 subunit signature.
62
78
IPR003956
GO:0005634|GO:0006355|GO:0043565
Phac7g02534
177
PRINTS
CCAAT-binding transcription factor subunit A signature
59
77
-
-
Phac7g02534
177
PRINTS
CCAAT-binding transcription factor subunit A signature
78
96
-
-
Phac7g02534
177
PRINTS
CCAAT-binding transcription factor subunit A signature
97
115
-
-
Phac7g02534
177
MobiDBLite
consensus disorder prediction
1
28
-
-
Showing 1 to 10 of 12 entries
Previous
1
2
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Phac7g02534
Phac-Chr7
29439568
29442895
Dispersed/Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Phac7g02534
1
177
CCAAT-HAP3 Transcription Factor Family
AT2G37060
71.111
6.93e-85
246
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Transcription factors information
Show
10
25
50
100
entries
Search:
Select
Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YB
Phac7g02534
CBFD_NFYB_HMF
8.3e-28
CL0012
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Phac7g02534
K08065
-
gmx:100798667
290.041
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows