Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02532 ATGGCCGCAGCTGCCCGCCCCCTCGTCACCGTCCAGTCCCTCGAGGGTGACATGGCAACCGACGCCGCCGCCACCGTACCCATTCCCGACGTCATGAAGACTTCCATCCGCCCCGACATCGTCAACTTCGTCCACTCCAACATTTCCAAGAACAGCCGTCAGCCCTACGCCGTCAGCCGCCGCGCCGGCCACCAGACATCCGCCGAGTCCTGGGGAACAGGTCGCGCCGTCTCCCGTATCCCTCGTGTGCCCGGTGGAGGAACCCACCGCGCCGGACAGGGAGCCTTCGGTAACATGTGCCGTGGTGGCCGCATGTTTGCCCCGACCAAGATCTGGCGCCGCTGGCACCGCAAGATCAACGTCAACCAGAAGCGATACGCTGTCGTCTCTGCCATCGCCGCCTCCGCCATCCCATCCCTCGTCCTTGCTCGTGGCCACCGCATCGAGACCGTCCCCGAACTCCCCCTCGTTGTCAGTGACTCTGCTGAAGGCGTCGAGAAAACTAAGGAAGCAATCAAAGTCCTGAAACAGATCGGTGCTTTTGCTGACGCTGAGAAAGCAAAAGACAGCCGCGGCATTCGACCTGGAAAGGGAAAAATGCGCAACCGCCGCTACATCTCTCGAAGGGGTCCACTCATCGTGTACGGAACAGAAGGAGCTAAAGCTGTTAAGGCTTTCCGTAACGTCCCTGGTGTTGAGGTCGCCAATGTTGAGAGACTCAACCTTCTTAAGCTCGCTCCCGGTGGTCACCTTGGGCGGTTTGTGATTTGGACTAAGTCTGCTTTTGAGAAATTGGACTCCATTTATGGCTCGTTTGATAAGCCCAGTGAGAAGAAGAAGGGTTACGTGCTGCCCAGGTCCAAGATGGTCAACTCAGACATCTCCAGGATTATTAATTCTGATGAGGTTCAGTCCGTCGTAAGGCCCACCAAGAAGGACGTGACTCGGGCTACTCTCAAGAAGAACCCTCTTAAGAATCTCAATGTCATGCTCAAGCTCAATCCCTATGCCAAGACTGCTAAGAGGATGGCTTTGCTTGCCGAGGCCCAGCGTGTTAAGGCCAAGAAGGAGAAGCTCGATAAGAAGAGGAAGACTGTATCTAAGGAGGAGGCTTCTACCATTAGAGCAGCAGGAAAGGCATGGTATCACACTATGGTCTCAGATTCTGATTATACAGAATTCGACAACTTTTCTAAGTGGTTGGGTGTTTCACAGTAA 1218 0.5525 MAAAARPLVTVQSLEGDMATDAAATVPIPDVMKTSIRPDIVNFVHSNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPELPLVVSDSAEGVEKTKEAIKVLKQIGAFADAEKAKDSRGIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNSDISRIINSDEVQSVVRPTKKDVTRATLKKNPLKNLNVMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKKRKTVSKEEASTIRAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02532 405 Pfam Ribosomal protein L4/L1 family 27 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Phac7g02532 405 Coils Coil 342 369 - -
Phac7g02532 405 PANTHER 60S RIBOSOMAL PROTEIN L4 4 398 IPR045240 -
Phac7g02532 405 MobiDBLite consensus disorder prediction 54 94 - -
Phac7g02532 405 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
Phac7g02532 405 FunFam 60S ribosomal protein L4 3 308 - -
Phac7g02532 405 Pfam 60S ribosomal protein L4 C-terminal domain 280 352 IPR025755 -
Phac7g02532 405 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Phac7g02532 405 MobiDBLite consensus disorder prediction 54 73 - -
Phac7g02532 405 SUPERFAMILY Ribosomal protein L4 10 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02532 Phac-Chr7 29416191 29418801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02532 2 405 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.673 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02532 K02930 - gmx:100779764 759.599