Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02530 ATGAACTCCAACACTTCCATTTCTCAGTCATTGACGGCGGCGGCGAGTGATGCGTCGGGGAAGAAGGTCAGAAAGCCTTACACCATAACCAAGTCAAGGGAGAGTTGGACTGAGGAAGAGCACGACAAATTTCTCGAAGCTCTTCAACTATTTGACAGGGATTGGAAAAAAATTGAAGATTTTGTAGGTTCAAAAACAGTTATTCAGATTCGAAGCCATGCTCAGAAATACTTCTTGAAAGTTCAAAAGAATGGGACTGTGGCACACGTGCCTCCACCCCGTCCTAAGCGCAAAGCTGCTCATCCTTACCCACAAAAAGCATCAAAAAATGTTTTGGTGCCATTGCCAGCTTCCATTGGTTATGCTTCTTCAACAAATATGCTTGCACACGGGTTTGCCGCATGGGATGAAACCTCCTTGCTGATGAATATAGGAGCCAGTAAATCCTTGACCTGTCAGGATGAACCCAACAATCTTTGTGGAAATGAAGCTGATATTGGATCAAAGGGGATAACACAGATTACCAACAGCACTCTTAGTGGTGTTAGAAATTCTACTAAATCGCTACCGACTTCTGAGATACCAAAGCAAGGGAAACAAGCTCCAGTTCTTCATGGTTTGCCAGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTATTTGATCCAGATACAAATGACCATATCCAAAGGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTTGAACCCATCGTGCACGTCTCCTTGATGTTTTATCTGTGTGACAAAATTAAACAAGAGCATGTTAATCCTGCTAGGCGTCTAAATGTATAA 867 0.4198 MNSNTSISQSLTAAASDASGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLVPLPASIGYASSTNMLAHGFAAWDETSLLMNIGASKSLTCQDEPNNLCGNEADIGSKGITQITNSTLSGVRNSTKSLPTSEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPDTNDHIQRLKEMDPINFETVLLLMRNLTVNLSSPDFEPIVHVSLMFYLCDKIKQEHVNPARRLNV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02530 288 FunFam protein REVEILLE 6 isoform X1 35 83 - -
Phac7g02530 288 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Phac7g02530 288 SMART sant 32 80 IPR001005 -
Phac7g02530 288 MobiDBLite consensus disorder prediction 1 32 - -
Phac7g02530 288 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
Phac7g02530 288 Gene3D - 36 83 - -
Phac7g02530 288 PANTHER SWI/SNF COMPLEX-RELATED 4 255 - -
Phac7g02530 288 ProSiteProfiles SANT domain profile. 31 84 IPR017884 -
Phac7g02530 288 CDD SANT 35 78 IPR001005 -
Phac7g02530 288 Pfam Myb-like DNA-binding domain 33 78 IPR001005 -
Phac7g02530 288 MobiDBLite consensus disorder prediction 1 16 - -
Phac7g02530 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 31 80 IPR006447 GO:0003677
Phac7g02530 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 82 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02530 Phac-Chr7 29407552 29412097 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g02530 Myb_DNA-binding 4.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02530 - - pvu:PHAVU_007G162800g 514.227