Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02514 ATGCATGATCCAGGGCTTGCAGCTGAACATCAAGGTATGTCAGAACATGTTGTCAAAAGGGCATATTCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCTCAGATTGCGTCTGCGGGCACTTGTTGCTTGGTGGGGGTAATTTGCAATGGAATGATATATATTGCAAATTCTGGAGACTCCCGGGTGGTGTTAGGAAGAGTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAATTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGCTCAAAGCACCCTTTTGATTCACAAATCGTGGTATTGAGACAAAACGTTTGGCGTGTGAAAGGGCTCATACAGGTTTCACGATCCATTGGGGACGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCAAAGTATAGGTTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCATCCCACACACTCCATCCTGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTACCAACCAAGAGGCTGTTAACATAGTCAACAGCAACCCACCAAACGGAGTTGCCAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCTGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGGCACATCCATGATGACATAACAGTGATTGTGGTGTTTCTTAATTCCAGAAGTGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTGCCAATTCCTAG 834 0.4388 MHDPGLAAEHQGMSEHVVKRAYSATEESFLSLVKKQWLSKPQIASAGTCCLVGVICNGMIYIANSGDSRVVLGRVERATRETEAIQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTLHPDDQFLIFASDGLWEHLTNQEAVNIVNSNPPNGVARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSRSENTSLCGSPLSIKGGGSANS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02514 277 ProSiteProfiles PPM-type phosphatase domain profile. 1 253 IPR001932 -
Phac7g02514 277 Coils Coil 214 234 - -
Phac7g02514 277 Gene3D - 4 261 IPR036457 -
Phac7g02514 277 SUPERFAMILY PP2C-like 13 255 IPR036457 -
Phac7g02514 277 PANTHER PROTEIN PHOSPHATASE 13 251 IPR015655 GO:0004722|GO:0006470
Phac7g02514 277 Pfam Protein phosphatase 2C 24 222 IPR001932 -
Phac7g02514 277 CDD PP2Cc 19 253 IPR001932 -
Phac7g02514 277 SMART PP2C_4 11 251 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02514 Phac-Chr7 29235427 29238511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02514 6 273 PP2C-type Phosphatase Gene Family AT3G12620 66.543 2.17e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02514 K01102 - gmx:100819870 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02514 7 29235427 29238511 Phac7g02514 7 29235427 29238511 ECH
Phac1g01980 1 29615118 29618217 Phac7g02514 7 29235427 29238511 PCT