Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02507 ATGGAAGAAACATCAACATCTACAATCATGGCTGCACTCTCCACCCTCACCCCTTCCCAATTCTCAGATCTCACCCACTCCATTCTCTCCGCAACCCTCTACCACCATCGCCGCCTCGCCTCCCTCCTTTCTTCTCCAACGCTCTTCTCTCTAACCCTCCACCACCTCCACTCCCTCTCCCTCCCCCAGAAGACCCTCCTCATCGCACGTCACCTCCTCTCCGCCCTCCACCTCCTCACTGCCACCTCCCCGCCGCCTTCCACAGCCACGAGGCAGCGCGACCTCGACGCTGCGCTCCTCCTCCTCCTCCTCTGCGAAACGCACAACCACAACCCACATGCCCTCGAGGCACCCTTTTCCCAATGGAGGATCAACCTCAGAACCATCTTCTCCGATTCATTGTTGACTCTTTCCTCTGCACCCTTTGGGGCATGCACGGGCTCGACGGTGCTGATTCCCTTCGTTGAGACCGTGGCGCGGTGCTGGAGACTCGTCGGCGCACTGGACTGCGGCGGAGGAAAGGAATCGGGGGAGGTGGCGGCGTCGTCTACGGCGGTGGTGGCGCTGCCATCGGTGGAGGTGAGGGCCGGTGGGATAGAGTGTGTGATATGCAGAGAGGAGATGGGAATAGGGAGAGACGTATGCGAGTTGCCATGTCAGCACTTGTTTCACTGGATGTGTATTTTACCGTGGCTGGGGAAGAAGAACACGTGCCCTTGCTGCAGGTTTCGGTTACCGTCCGATGATGTCTTTGGAGAGATCCAACGGCTGTGGGAAGTGTTAGTTAAAACCGCTGCCAAAGATTCGTAG 810 0.584 MEETSTSTIMAALSTLTPSQFSDLTHSILSATLYHHRRLASLLSSPTLFSLTLHHLHSLSLPQKTLLIARHLLSALHLLTATSPPPSTATRQRDLDAALLLLLLCETHNHNPHALEAPFSQWRINLRTIFSDSLLTLSSAPFGACTGSTVLIPFVETVARCWRLVGALDCGGGKESGEVAASSTAVVALPSVEVRAGGIECVICREEMGIGRDVCELPCQHLFHWMCILPWLGKKNTCPCCRFRLPSDDVFGEIQRLWEVLVKTAAKDS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02507 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 248 IPR013083 -
Phac7g02507 269 CDD RING-H2_PA-TM-RING 200 242 - -
Phac7g02507 269 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 139 246 - -
Phac7g02507 269 SMART ring_2 201 241 IPR001841 -
Phac7g02507 269 SUPERFAMILY RING/U-box 197 247 - -
Phac7g02507 269 Pfam Ring finger domain 200 242 IPR001841 -
Phac7g02507 269 ProSiteProfiles Zinc finger RING-type profile. 201 242 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02507 Phac-Chr7 29182538 29184281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02507 1 265 C3H Transcription Factor Family AT5G02750 51.786 3.91e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02507 - - gmx:100810879 384.8