Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac7g02483 | ATGTCACCCAAATCTGACTCAAAAAGAAGATCCCCTGGAGTCATTGCCAGATTGATGGGTCTTGATGGACTGCCATTTCAGCAGCCTATTAGTAAGCAGCATAAGGGTTTGTCTGAAAACCAGAAGACACCACAATTACAGAAAACACGCGGCAAAGGAGTGCCATATGATGGTGGATCATCTAGGAGAGGCTTAAGGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCGGAAATTCCAAAGGTAGAGAGCAGTAGATATCCATCACCAGGGTGTGTAGACTTGAAGGCCAATGATGCTGAGATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTACAGTCTTCAAAGGACTTCCGAGACACACTTGAGGTTTTGGATTCCAACAAGGATCTCCTGCTGAAATATTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAGCTGATCCTGTCAAATCACATTATGGTAATGTAGAAACTATGGATATTGAGAAGTATGAACATGAACATGACTTAAGTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAATCATCTTGATGGTTATCCTTGTCATTTTGACAAAAGACATGTGATGCATAGTTCACCAAGATCATCAAAGCTTCAATTTCAGGGCAGACATGAACAAGATGCAGTCCCCACAAAGATTGTCCTCCTGAAACCCAATCTTGGAAAAGTTCAGAATGGTACCAGAATTGTATCATCACCATGTTCTCACAATTTTCTGTCAGGCCGTGAAAAGGACACTGAACTGTGTCAAGTGACAAATATGCCCGAAAGTGCAAGGTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAGAAATAGTCTTAACAATAGCGGCATGATGCTTTCAACTTCTAGAATTGCAGGATATGCTGGGGATGATAGTTCATGTAGTTTTTCTGGTAATGAATCTCCTGATGTGTCTGGGGAAATAACTGCAATTTTGGGAAATTCGTTTGACTTAAACAACCGTACTAGGCGATCTTCCCGTTCTGGTGAATCTTCTGTCAGTAAAGAGGCAAAGAAGAGATTATCGGAGAGGTGGAAAATGACACACAAGTCTCAAGAGCTGCAAGGCATCAGTAGGAGCAGCACGCTGGCAGAAATGCTTGCTATCCCTGACAAAGAATTGAAGGCTGCAAATTTTGCCGGCATGGCTACTGGGGAAGGTTTCCGTGATAAGTTTATTCCCAATAGTGAACCTGCTAAATGGGTTGAACCATTGGGTATCAGTAGCAGGGATGGTTGGAAGGATGGCTGCATTGGCAGTTTGTCAAGGTCAAAATCCCTTCCTTCTTCCTCCACTGCCTTTGGAAGTCCTAGAAGATTCTTGCACACTGAAGCACTTCGTGCTGATCGATTTATGGTGCCAAAGGAAGCCCATAAACGTGAGAGAAGAAGAGCAGCAAAGAATTTTGATCATAGACATGGTAATAACAGAAACTCAAGATCTGGTCACAAGAAGTCTTGGTCTTTGCATTCGTCAAAGCTAGAAGTTGATGAGTTTTGTGCTGACTCGCATACAGTTCAGAATAAAACGAATATCATTCTTGAAGATTCGCCCAAGCTTGAAGTTCCAAGTGCAGTTGCTGATGAGGACATGGAGGTGACAAATGGAAAAGTTGAGTCTTCTGAACCTTTGAATAAGGTGCTTCCTGAATTATCTTCTCATGTTTTGATAGAAGGCGATGGTGGCGCGGTTGACAAAGACAATTCAATACAGCAGGATCTATCAGCTGCGTCGCCTGGTGTAAGTTCAGTCAACCATGAAACACCTGTTCCTGGACTTGAATCTTCTTGCTGTAAAGATGCTGATCAACCCAGCCCTGTCTCCATCCTAGAGCCTGCTTTTACAGATGATCTGTCTTCTTGTTCTGAATGTTTTGAAAGTCTCAATGCTGATCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGATTATGTGGAGGGACCCATGACAGTAAGTGATGAAGATGGTGAGGAAGTATCTCCTGGAATGTTAGTAGCAGACAAAGGATTACGTCTAAGAACTGAAGATAGCTGGGAATGTTCCTACATTATTGATGTCTTGTCCGAATCTGGCATTGATGGAGTTCATCTGGATACAATTTTGGAAGTTTGGCATTCCCTGGAATGCCCTGTGAGTCTTTCGGTGTTTGATGAACTTGAAGAAAGGTATAGTGATGGGACAGCTTGTTCAAGGTCTCAAAGGAGATTACTTTTTGACCATATAAATATAGGAATTCTGAAGATCAGTGAGCAATTCTCTTTCTCTAGATCAGCAATCAGAAATGCCATTGGTTCTAATTTGACCAAAAATGGGTTCCGAGATGGGCTTCTGAGGATGCTAATGGACGAAGCAAAAGTAAGGGATGGTGGTCAGGGGAATGTGGTGGTTGGGGAATCTGAGTGGATGGACCTGAAAGTTGACATTGATGCAATAGCCAGGGAAGTTGAGAGATCATTGTTAGATGATTTAGTGGCAGAGATAATCGGTATCTAG | 2634 | 0.4222 | MSPKSDSKRRSPGVIARLMGLDGLPFQQPISKQHKGLSENQKTPQLQKTRGKGVPYDGGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKANDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQADPVKSHYGNVETMDIEKYEHEHDLSWRSDREKTRLNYNRSHENHLDGYPCHFDKRHVMHSSPRSSKLQFQGRHEQDAVPTKIVLLKPNLGKVQNGTRIVSSPCSHNFLSGREKDTELCQVTNMPESARSWRQDSFESREIAKEITRQMRNSLNNSGMMLSTSRIAGYAGDDSSCSFSGNESPDVSGEITAILGNSFDLNNRTRRSSRSGESSVSKEAKKRLSERWKMTHKSQELQGISRSSTLAEMLAIPDKELKAANFAGMATGEGFRDKFIPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRRFLHTEALRADRFMVPKEAHKRERRRAAKNFDHRHGNNRNSRSGHKKSWSLHSSKLEVDEFCADSHTVQNKTNIILEDSPKLEVPSAVADEDMEVTNGKVESSEPLNKVLPELSSHVLIEGDGGAVDKDNSIQQDLSAASPGVSSVNHETPVPGLESSCCKDADQPSPVSILEPAFTDDLSSCSECFESLNADLQGLRMQLQLLKLESEDYVEGPMTVSDEDGEEVSPGMLVADKGLRLRTEDSWECSYIIDVLSESGIDGVHLDTILEVWHSLECPVSLSVFDELEERYSDGTACSRSQRRLLFDHINIGILKISEQFSFSRSAIRNAIGSNLTKNGFRDGLLRMLMDEAKVRDGGQGNVVVGESEWMDLKVDIDAIAREVERSLLDDLVAEIIGI* | 878 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 370 | 392 | - | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Phac7g02483 | 877 | Pfam | Domain of unknown function (DUF4378) | 727 | 873 | IPR025486 | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 498 | 530 | - | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 618 | 632 | - | - | |
| Phac7g02483 | 877 | Pfam | DUF761-associated sequence motif | 6 | 25 | IPR032795 | - | |
| Phac7g02483 | 877 | PANTHER | AFADIN | 1 | 875 | - | - | |
| Phac7g02483 | 877 | Coils | Coil | 667 | 687 | - | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 31 | 48 | - | - | |
| Phac7g02483 | 877 | Pfam | Protein of unknown function (DUF3741) | 107 | 151 | IPR022212 | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 361 | 395 | - | - | |
| Phac7g02483 | 877 | MobiDBLite | consensus disorder prediction | 618 | 640 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac7g02483 | Phac-Chr7 | 28962538 | 28967171 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac7g02483 | 1 | 875 | TRM (TON1 Recruiting Motif) Superfamily | AT3G53540 | 36.394 | 1.53e-130 | 413 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac7g02483 | - | - | ccaj:109788117 | 1272.3 |