Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02475 ATGGTAGCTATTCTGAAGAGACAGAGAGAAGCGGAATCAGAAGAGATTAAGGATTTGGCCAAGAGTTTTTCGCCTCACGAGTTCCAGTGTAAGACGTGTAACCGCAAATTCTCGTCGTTCCAAGCGCTGGGAGGCCACCGGGCCAGCCACAAGAAGCCCAAGTTCGACGGAGAAGAGGCAAAGGATCTGAGTCTGGGCCGGAAGCCCAAAGCGCACGAGTGTTCGATTTGCGGGCAGGAATTCTCCTTGGGCCAGGCCCTGGGAGGGCACATGAGAAAACATAAGGGTAGCATGAACGAAGGGTTTTCTTCTGCTATTATTCCCAAAGCACCGGTTCTGAAACGTTCCAATAGCAGCAAGAGGGTGATGTGCTTGGAGCTGGATCTCAACCTAACGCCGTTGGAAAATGACTTGAAGTTGTTGTTCGGAAACAAGGCTCCCACGGTGCATCTTTCGTTGTAG 462 0.513 MVAILKRQREAESEEIKDLAKSFSPHEFQCKTCNRKFSSFQALGGHRASHKKPKFDGEEAKDLSLGRKPKAHECSICGQEFSLGQALGGHMRKHKGSMNEGFSSAIIPKAPVLKRSNSSKRVMCLELDLNLTPLENDLKLLFGNKAPTVHLSL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02475 153 Gene3D Classic Zinc Finger 64 124 - -
Phac7g02475 153 MobiDBLite consensus disorder prediction 45 66 - -
Phac7g02475 153 Gene3D Classic Zinc Finger 26 48 - -
Phac7g02475 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Phac7g02475 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Phac7g02475 153 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Phac7g02475 153 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Phac7g02475 153 SMART c2h2final6 28 50 IPR013087 -
Phac7g02475 153 SMART c2h2final6 72 94 IPR013087 -
Phac7g02475 153 SUPERFAMILY beta-beta-alpha zinc fingers 28 94 IPR036236 -
Phac7g02475 153 PANTHER ZINC FINGER PROTEIN ZAT5 16 137 - -
Phac7g02475 153 Pfam C2H2-type zinc finger 71 95 - -
Phac7g02475 153 Pfam C2H2-type zinc finger 28 53 - -
Phac7g02475 153 Coils Coil 2 22 - -
Phac7g02475 153 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02475 Phac-Chr7 28899088 28900212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02475 20 143 C2H2 Transcription Factor Family AT2G37430 58.140 2.58e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02475 zf-C2H2_6 3.2e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02475 - - vra:106771374 241.891