Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02474 ATGAAGAGACGCAGAGAAGAGAAAGTGGATTTGGCAAATTGTCTAATACTACTCTCACATCCCAGAGAAGTCAAACCCCAAAAACTTTTAGGCCCTGTGGAATATGAGTGCAGAACCTGCAACCGCAAGTTCTCTTCGTTTCAAGCCCTTGGTGGCCACAGGGCCAGCCATAAAACTCCCAAACAAGACCTAAAAGAAGAGGACAAAATTGTGAGATTGGAAAATAAGCCCAGAAGGCACGAGTGCTCCATTTGTGGTCAAGAATTCTCTCTGGGTCAGGCACTGGGAGGGCATATGAAAAGGCACAGAATTGCCCTAAACGAAGGGTTTTCTTCAATAAACCAGGTTGTGGTAAAAGTCCCGATTCTGAAAAGGTCGAATAGTAGGAAGATTATTTGCTTGGATTTGAACTTGACCCCTCTGCAGAATGACTTGAAGTTATTGTTTGGCGACAAAGCACCCAAAGTTGATTCCTTAGTCTGA 483 0.441 MKRRREEKVDLANCLILLSHPREVKPQKLLGPVEYECRTCNRKFSSFQALGGHRASHKTPKQDLKEEDKIVRLENKPRRHECSICGQEFSLGQALGGHMKRHRIALNEGFSSINQVVVKVPILKRSNSRKIICLDLNLTPLQNDLKLLFGDKAPKVDSLV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02474 160 SMART c2h2final6 35 57 IPR013087 -
Phac7g02474 160 SMART c2h2final6 80 102 IPR013087 -
Phac7g02474 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 102 IPR013087 -
Phac7g02474 160 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Phac7g02474 160 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Phac7g02474 160 Gene3D Classic Zinc Finger 32 102 - -
Phac7g02474 160 PANTHER ZINC FINGER PROTEIN ZAT5 4 144 - -
Phac7g02474 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Phac7g02474 160 SUPERFAMILY beta-beta-alpha zinc fingers 35 102 IPR036236 -
Phac7g02474 160 Pfam C2H2-type zinc finger 35 59 - -
Phac7g02474 160 Pfam C2H2-type zinc finger 79 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02474 Phac-Chr7 28892294 28892981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02474 1 157 C2H2 Transcription Factor Family AT2G37430 45.977 5.74e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02474 zf-C2H2_6 3.8e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02474 - - gmx:100793243 263.077