Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02458 ATGGGAGAAGAAGCGGTTTGTGTGCATGCATTAGATGAAGGAAGGAAGGAAAACAATGAGGAATCAAGGACGGAACTGAAGCGTGACTATGACCAATGCGTTGGTGATACAGAACGTCACCTGTTTCCTCATAAGAAACAGATGAAAGAAGTTTCGAACGATGAAGTGCGCTCTGAGGTTTCTAACCCCAACGTTTCTGCAGCAGAGCATGCCTTAACTTTTCAAGATATCAGTAGCCAACCAACTGAATCCACTGATGTTAACCATGCAGAGTGTGGGGAACTGACGTCTACTCTTTTGGAGAATTCAAGTTCTGATGAGACCTTGAGTGACGAAGCTGGTGATCAGAATATTACTACTACTACAAATAATAGTAATAATAACAACAATATTTCTCAGAGTGATAAGGACACGAGTAGTGCTGCAATGACATCCTGTGTTGTGATGGAAATCCCCAAGCATGCTAGTTCATCTGGGATCAGGAAGATTACTTTTAAGTTCAGTAAAAAGAAAGAGGACCATGGTTACCAACCACCTGCTCCTGTGCACCGTTCCGCTGTTTACACTGATGGCAATCACATTGGTTTTCATGGGGTTGATGAATATTTGGCAAGGGACTATTGTAGTGGTGGGTCGGTAGAAAGCATGGGTTATGTTCATGATGGAGATTTGGAATCGTACGCTCACAATTTGGAATTGAAAATGTCCAAGAAAGTAGTTCCCAACTGCTACCCTACAAATGTCAAAAAGCTTTTATCAACTGGAATCCTTGACGGAGCTGTAGTGAAGTATATTTACAATCCTGGAAAGGTTGAACTACAGGGGATTATTGATGCTGGTGGATATTTGTGTGGCTGTTCAATGTGCAATTACACTAGAATTCTTAGTGCCTATGAGTTTGAGCAGCACGCAGGAGCCAAGACTAGACATCCAAATAATCATATTTTCTTAGAAAATGGAAGACCGATATATAGTATTATACAGGAAATAAAAACTGCTCCACTCAGTATATTAGATGAGGTTATAAAGAATGTGGCTGGTTCCTCTGTCAATGAGGAGTCTTTCCAGGTTTGGAAAGAAAATATTCTACACAGCAACGGCAAGGTTCAGGCTTATAAAAACTGTAGCACCAAACATGTTGGCATGTCTCATACAAACATAAGTCAATCTGTAGATAATACTAGCCACTTGTCGTCTTTGCACGTGCCAAGTCATTATGAGCAGCTCAAGTATATGAATCAGACAAATGACGAATGGAAACGTGTGATGAAAAAGTCAAGCTCCTACTCTTCTAATTCTGGTGTACTTCTGAAAAGAACTGCTGACGGTTGCACTAAGAGAAGGGACAATGATTTACACAGGTTACTTTTTATGCCAAATGGGCTACCAGATGGTGCTGAGTTGGCTTATTATGTCAAGGGACAGAAATTACTTGGAGGTTACAAACAGGGAAGTGGTATAGTCTGTGGTTGTTGTGATATTGAGATAAGCCCTTCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGGCGTCAACCTTATCGACACATATATACTTCCAATGGGTTAACACTTCATGATATAGCTCTCTCATTGGCAAATGGTCAAAACCTTACCACGGGAGACAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGTAATGGATGCCCTAGGGCCTTTCATACAGCCTGCTTGGGTTTACAGTGTGCTCCAGACAGTGGTTGGCGATGTCTAAATTGTGGAGATAACGCTGGTAATGGAAGAGAATCTTCTATTGTGAGGCCAATCATGATCCGGTTGACACGAGTTGATAAAACACCAGATTTTGAAATGGGTGGATGTGTTGTTTGCAGGGAGCATGATTTCAGTGTTGCAAAATTTGATGAACGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGCTGCTTGCGGGACATTGGGCTTTGTGAGTTGGAAGAGCTGCCCAAGGATAAGTGGTTTTGTTGCAGTGACTGCAATCGAATATATGTGGCTCTACAGAATTCAGTTTCTGCTGGAGCAGACATTATACCAGCTTCCTTGTCAGAACTAATAATCAGGAAGCATGAGGAAAAGGGATTATGTACCTATGGTTCCAAGGATGATATTCAGTGGAGAATTTTAAGTGGAAAAAGCCGTTATCCAGAACATTTACCCTTGCTTTCGCGAGCTGCTGCTATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAATATCTGGCCGTGATCTGATTCCTGTTATGGTCTACGGGAGAAATATTTCTGGCCAAGAGTTTGGGGGGATGTATTGCATTGTTTTAATAGTGAATTCTGTTGTAGTATCTGCTGGGCTTCTGAGGATTTTTGGCCGTAATGTTGCTGAGCTTCCAATCGTTGCTACTAGCAGAGTACATCAAGGAAAAGGATATTTCCAAGTGTTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAACGTAGAAAAGCTGGTGCTTCCTGCAGCAGGGGATGCAGAGTCAATTTGGACTAAGAAATTGGGCTTCCGAAAGATGAGTGAGGATCAGTTATCCAAACATCTCAGAGAGGTGCAGCTAACTCTCTTCAATAAAACTTCAATGCTGGAGAAGACAGTGGAGCAGACTATAGAATGA 2676 0.4182 MGEEAVCVHALDEGRKENNEESRTELKRDYDQCVGDTERHLFPHKKQMKEVSNDEVRSEVSNPNVSAAEHALTFQDISSQPTESTDVNHAECGELTSTLLENSSSDETLSDEAGDQNITTTTNNSNNNNNISQSDKDTSSAAMTSCVVMEIPKHASSSGIRKITFKFSKKKEDHGYQPPAPVHRSAVYTDGNHIGFHGVDEYLARDYCSGGSVESMGYVHDGDLESYAHNLELKMSKKVVPNCYPTNVKKLLSTGILDGAVVKYIYNPGKVELQGIIDAGGYLCGCSMCNYTRILSAYEFEQHAGAKTRHPNNHIFLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFQVWKENILHSNGKVQAYKNCSTKHVGMSHTNISQSVDNTSHLSSLHVPSHYEQLKYMNQTNDEWKRVMKKSSSYSSNSGVLLKRTADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGSGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHTACLGLQCAPDSGWRCLNCGDNAGNGRESSIVRPIMIRLTRVDKTPDFEMGGCVVCREHDFSVAKFDERTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCSDCNRIYVALQNSVSAGADIIPASLSELIIRKHEEKGLCTYGSKDDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGRNVAELPIVATSRVHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKHLREVQLTLFNKTSMLEKTVEQTIE* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02458 891 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 678 IPR013083 -
Phac7g02458 891 FunFam PHD zinc finger protein 618 678 - -
Phac7g02458 891 PANTHER AUTOIMMUNE REGULATOR 16 885 - -
Phac7g02458 891 ProSitePatterns Zinc finger PHD-type signature. 547 586 IPR019786 -
Phac7g02458 891 MobiDBLite consensus disorder prediction 10 29 - -
Phac7g02458 891 SUPERFAMILY FYVE/PHD zinc finger 616 673 IPR011011 -
Phac7g02458 891 FunFam PHD zinc finger protein 767 874 - -
Phac7g02458 891 CDD PHD1_AIRE 546 586 - -
Phac7g02458 891 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 534 608 IPR013083 -
Phac7g02458 891 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 770 862 IPR016181 -
Phac7g02458 891 Gene3D - 717 885 - -
Phac7g02458 891 MobiDBLite consensus disorder prediction 101 138 - -
Phac7g02458 891 ProSiteProfiles Zinc finger PHD-type profile. 544 589 IPR019787 -
Phac7g02458 891 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 534 612 - -
Phac7g02458 891 Pfam Tify domain binding domain 480 529 IPR032308 -
Phac7g02458 891 Pfam Tify domain binding domain 275 329 IPR032308 -
Phac7g02458 891 SMART PHD_3 619 676 IPR001965 -
Phac7g02458 891 SMART PHD_3 546 587 IPR001965 -
Phac7g02458 891 ProSitePatterns Zinc finger PHD-type signature. 620 675 IPR019786 -
Phac7g02458 891 SUPERFAMILY FYVE/PHD zinc finger 542 586 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02458 Phac-Chr7 28781122 28791401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02458 1 886 PHD Transcription Factor Family AT3G53680 52.053 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02458 - - gmx:100808999 1588.16