Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02447 ATGGCGGCGGCGTCGCGGCGGCTCCGGGACCTCCAATCTCAGGCGGCGAACAAGATCTGCGTTGACTGCTCCCAGAAGAACCCGCAGTGGGCATCCGTCTCGTACGGCGTCTTCATGTGTCTGGAGTGCTCCGGCAAACACCGTGGCTTGGGCGTCCACATCTCCTTCGTCCGATCTGTCACCATGGACTCCTGGTCCGAAGTCCAGATCAAGAAAATGGAAGCTGGCGGCAACGATAAACTCAACGCCTTCCTCGCTCAGTATTCCATCCCCAAGGAGACAGACATCGTCACTAAATACAACACCAACGCCGCCGCCGTCTACCGCGACCGGATCCAGGCCATCGCCGACGGCCGTCCCTGGCGAGATCCGCCGGTAGTGAAGGAAAACCTCGCAGCAGGCAAGGGGAAACCGCCGCTGACGCAGACGCGAAGAGCTAGCGAGGGAGGATGGGACGATTGGGACAACGAGGGGAGTTCAGCGGACTTCCGGAGCAAGTCAACCGGGGACTTCAGTAGCTTGAACGGCGCGGGCGCGCCGGCGAGGTCGAGGTCGACGGAGGACATCACGCGGTCGCAGCTGGAGGCGTCAGCGGCGAACAAGGAAAGCTTCTTCGCGAGGAAGATAGCGGAGAACGAGTCGCGGCCGGAGGGGCTTCCGCCCTCGCAGGGAGGGAAGTTCGTAGGGTTCGGGTCCAGTCCGCCGCCTCAGCGAAGGAACGATGCTCAACACGATTATTTATCTGTCGTTTCGCAGGGGATTGGGAAATTGTCTTTGGTTGCTGCCTCTGCTGCTCAGTCTGCGGCTAATGTTGTTCAGGCTGGCACGAAGGAGATCACTTCTAAGGTCAAGGAAGGTGGTTATGATCACAAGGTCAATGAAACTGTCACTGTTGTCACTCAAAAGACGTCAGAGATAGGACAGAGGACTTGGGGCATAATGAAAGGAGTTATGGCCATGGCCTCCCAGAAGATCGAGGAGTACACTAGAGATGATCCGAACTGGAAGACTGATAACTGGCAACGAAATGACAGTGATAGAAATGGTTATTATCAGGATTTTAACCAACAGAACAAAGGCTTGAATTCTTCTCCTGGAAGAGAACAATCTTCATCAGGGCAATATAAAACTCATAGCTCAAGCTCTTTGGATGATTGGGACCACCGAGATAGCAGGAAGGAAGTACCATCTAAAGGAACAACTCCCTATTCATCAGGTGGACAGTCTAGTACCTACAACTCAAGCTCTTGGGATGATTGGGAACACACAGATTCTAGGAAGCAGGAACCAGCTAAAGCAGCAGCTCCGCATAATAATGATGATTGGGCTGGCTGGGATAATGCCAAAGATGATGGATTTGATAATTTTTACCAGGATGCGTCTAATAAGAAAGGTGTTGGCCATAATGGAAAATCGGATGGCACTTGGACAGAGGGAGGCTTTCTCTAA 1449 0.5355 MAAASRRLRDLQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEVQIKKMEAGGNDKLNAFLAQYSIPKETDIVTKYNTNAAAVYRDRIQAIADGRPWRDPPVVKENLAAGKGKPPLTQTRRASEGGWDDWDNEGSSADFRSKSTGDFSSLNGAGAPARSRSTEDITRSQLEASAANKESFFARKIAENESRPEGLPPSQGGKFVGFGSSPPPQRRNDAQHDYLSVVSQGIGKLSLVAASAAQSAANVVQAGTKEITSKVKEGGYDHKVNETVTVVTQKTSEIGQRTWGIMKGVMAMASQKIEEYTRDDPNWKTDNWQRNDSDRNGYYQDFNQQNKGLNSSPGREQSSSGQYKTHSSSSLDDWDHRDSRKEVPSKGTTPYSSGGQSSTYNSSSWDDWEHTDSRKQEPAKAAAPHNNDDWAGWDNAKDDGFDNFYQDASNKKGVGHNGKSDGTWTEGGFL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02447 482 CDD ArfGap_ArfGap1 4 118 - -
Phac7g02447 482 FunFam ADP-ribosylation factor GTPase-activating protein 1 130 - -
Phac7g02447 482 ProSiteProfiles ARF GTPase-activating proteins domain profile. 5 111 IPR001164 GO:0005096
Phac7g02447 482 MobiDBLite consensus disorder prediction 443 457 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 381 396 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 161 197 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 344 380 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 211 241 - -
Phac7g02447 482 Pfam Putative GTPase activating protein for Arf 6 106 IPR001164 GO:0005096
Phac7g02447 482 MobiDBLite consensus disorder prediction 419 434 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 397 418 - -
Phac7g02447 482 MobiDBLite consensus disorder prediction 330 482 - -
Phac7g02447 482 Gene3D Arf GTPase activating protein 1 124 IPR038508 -
Phac7g02447 482 SMART arf_gap_3 2 121 IPR001164 GO:0005096
Phac7g02447 482 PRINTS HIV Rev interacting protein signature 17 36 IPR001164 GO:0005096
Phac7g02447 482 PRINTS HIV Rev interacting protein signature 57 78 IPR001164 GO:0005096
Phac7g02447 482 PRINTS HIV Rev interacting protein signature 36 53 IPR001164 GO:0005096
Phac7g02447 482 SUPERFAMILY ArfGap/RecO-like zinc finger 6 112 IPR037278 -
Phac7g02447 482 MobiDBLite consensus disorder prediction 119 197 - -
Phac7g02447 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 2 399 IPR044519 GO:0005096|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02447 Phac-Chr7 28673984 28678772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02447 6 92 C2H2 Transcription Factor Family AT4G21160 48.864 2.92e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02447 K12492 - gmx:100806519 840.491