Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g02429 | ATGAATCACTGTGTTCCAGATTTCGAAATCCAAATGGAGGACGACGAAGAATTCCCAATTCCCGTCTCAAAGAAACCCTCCATGCAAAACGACGAGATCATGGAACTGTTATGGCAAAACGGTCAGGTTGTGATGCACAGCCAAAACCATCGACCACTCAGAAAACCGCCGCATACGTTGCCTTCCGGCGGAGGCGACGGCGTCATTCCGGCCAGGGAGATTCGATCTTCTGAACACGAAAACTACGGTAACCAACACTTGTTCATGCAAGAAGACGAAATGGCTTCGTGGCTTCACTATCCAATCCACGAAGATCCTCCACCCTTCGATCATCACGATTTCTGCGCCGACATGCTCAATCCGCCGACAAACGCAATAGCGAGCCAGAGTCACAGCAGCGCCGCCATACAATCCTCCATTCGCACGACGGAGCTTCGGCATCCGGCTCCTCGGCCGCCGATTCCTCCGTCTCGGCTGCCGGTGCCTGCGGCAAAAAGGATGCAGAATTTCGCGCACTTCTCGAAGCAAGGCAATGCGTCGTCGAGTTCGAAGGCCGCGGCGGCGCAGCCGACGGTGGTGGATTCGTGCGATACGCCGGTTGCGACGGCGGAGCTCGCTGAAACCGGCCGCGCGAGCGTGACCGCTGCCGATGCAGGTAAGGCGGCAGAGTCTGGAGGAAGGGAGGCGGCGACGTGCGATTTGACGGTGACGTCATCTCCTGGCGGTTCAAGCGGGAGCGCGGAACCGGTTCAAAGGGAACTGGACCGGAAGAGGAAGGGGAGAGAACCGGAGGAATCGGAGTTTCAGAGCGAGGACGTCGATTTTGAATCTCCGGAAGCTAAAAAACATGGGCGTGGTTCTACATCTACTAAGAGATCTCGTGCTGCAGAAGTCCACAATCTCTCCGAGAGGAGGCGTCGAGATAGAATTAATGAGAAAATGAAAGCTTTGCAAGAACTTATACCTCGATGCAACAAGTCTGACAAAGCTTCAATGCTGGATGAAGCAATTGAATATTTGAAGTCACTGCAATTACAAGTGCAGATGATGTCCATGGGATGCGGCATGGTACCCATGATGTTTCCTGGAATCCAGCAGTATATGCAGCCAATGGGAATGGGAATTGGCATGGGTATGGGCATGGAAATGGGAATGAACAGACCGGTAATGCCATTTCCCAATATGTTAACTAGTTCAACTTTGCCAGCAGCAACTGCAGCTGCGCATTTGGGACCGAGGTTCCCTATGCCTCCTTTCCATATGCCCCATGTTCCTGCCCCTGATTCATCCAGAATGAAAGCATCAAATCAGTCAGATAATAATATGCTTAACGCACTTGGTACACAAGGTCCAGATCAATCACATATCCCAAACTTCACTGATCCTTATCAACAATACGTCGGCCTCCAACAGGTGCAGTTACAATTGATGCAGGTAAAGTTGTCCTTAATGCTATGTCTGATTTTCTCGGTTCTTTTTCTTTCGATGGGTGGGGGATTTAAGCTACCTGAGGGACATCATATTCCAGCCACCGTTACATATCATCTTCTTTAG | 1554 | 0.5122 | MNHCVPDFEIQMEDDEEFPIPVSKKPSMQNDEIMELLWQNGQVVMHSQNHRPLRKPPHTLPSGGGDGVIPAREIRSSEHENYGNQHLFMQEDEMASWLHYPIHEDPPPFDHHDFCADMLNPPTNAIASQSHSSAAIQSSIRTTELRHPAPRPPIPPSRLPVPAAKRMQNFAHFSKQGNASSSSKAAAAQPTVVDSCDTPVATAELAETGRASVTAADAGKAAESGGREAATCDLTVTSSPGGSSGSAEPVQRELDRKRKGREPEESEFQSEDVDFESPEAKKHGRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMQPMGMGIGMGMGMEMGMNRPVMPFPNMLTSSTLPAATAAAHLGPRFPMPPFHMPHVPAPDSSRMKASNQSDNNMLNALGTQGPDQSHIPNFTDPYQQYVGLQQVQLQLMQVKLSLMLCLIFSVLFLSMGGGFKLPEGHHIPATVTYHLL* | 518 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 250 | 266 | - | - | |
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 231 | 246 | - | - | |
Phac7g02429 | 517 | FunFam | Basic helix-loop-helix transcription factor | 289 | 352 | - | - | |
Phac7g02429 | 517 | PANTHER | TRANSCRIPTION FACTOR PIF3 | 21 | 177 | IPR044273 | GO:0003700|GO:0006355 | |
Phac7g02429 | 517 | SMART | finulus | 300 | 349 | IPR011598 | GO:0046983 | |
Phac7g02429 | 517 | CDD | bHLH_AtPIF_like | 294 | 357 | IPR047265 | - | |
Phac7g02429 | 517 | Pfam | Helix-loop-helix DNA-binding domain | 298 | 344 | IPR011598 | GO:0046983 | |
Phac7g02429 | 517 | Coils | Coil | 300 | 320 | - | - | |
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 210 | 309 | - | - | |
Phac7g02429 | 517 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 292 | 360 | IPR036638 | GO:0046983 | |
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 174 | 189 | - | - | |
Phac7g02429 | 517 | MobiDBLite | consensus disorder prediction | 274 | 309 | - | - | |
Phac7g02429 | 517 | Gene3D | - | 289 | 352 | IPR036638 | GO:0046983 | |
Phac7g02429 | 517 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 294 | 343 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g02429 | Phac-Chr7 | 28493566 | 28497868 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g02429 | 1 | 349 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G20180 | 41.053 | 1.76e-64 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Phac7g02429 | HLH | 6.3e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g02429 | - | - | gmx:100788491 | 639.417 |