Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02415 ATGGCGCCTTCTGCTGAAGAAATTGTTAAACTTGACACACTAGGTCTGTTTTGTTCAATGAACATCCGCGGTGAACTTGGGTATGTTGATCATGCATTTGCTATTAACTTTCAAAAAGAACTTGGTGAACAGTGGACGCTTGCAGATAGTGCTGGTAATGTACATACAGTAGAATATAACCAAGATTTGTTGTCGCCAGAAATCATGACAGGGTGGTGGACTTTGGCTGATTTTTATGGGTTTGAAGGGGATCACACTATCTTATTCCGTTACGTCGGCCAAAATGCTTTCCATATAACTGTTTACATGGAAGATATACCTGAAATTTATTTCAATCGTTATTTGGATGAAGTTGAAGGGAGGAAACCGTTGACTATTGGTCCCTTTCACCATTTTTCCATTAAGTTGTCTTCGGTTGACCTAAATGGAATTTCTTTGGGTATACCTCCTGCATTTTCTGAATATCTTCGCCAAGGTACATTTCAAACGGTTACACTGCATGGACTATTGAAGGAAGTTGAATGCAAGGTTTTAAAAGGAAGGTTTCCTTATAGAACCATTAAAATTGGTAGCGGATGGAAGAACTTTTGTCGTAGTCATTCCTTTCATGAAGGCCAAAAAATCATATTTGAATGTGATAGCAGAAACCCATCATCTCATATCAGGGTTCTGCTTTTGATGACAAAGCCTCTTTTTGGTTTTCAGGAAAGCACTTTTGTTGTTTTAGCTACTATAAAACATATTGTAGCTAATGATGAATGGTGGTACACGGCTTGCTTATGCAATAAAGCTGTTTACCCAGATTCCAAAATGTTTTTCTGTGAGAAATGTAATAAGCATGTAATGAAAGTTCAACCAAGGTATAAGCTGAAGGTGCGAGTAATGGATGAAACAGATTCAACCACTTTTGTTCTTTTTGACAGGGATGCAACGACACTGATCAATAAATCTTGTGCGGAATTATTTGAAAGTAATGACAAGAATGGTATTGTTGATCGTGCATTCGCCGTTGAGTTTCAAGGCGAACTTTCTAAGGAGTGGACCCTGGCAAATAGTGCAGGCAACATTCATAAAGTATATTATAACCAGAATATACTGGCTCCCGAAATTTTTTATGGATGGTCGGCTTTGAGTTCTTTTTATGGGCTTAAAGGCGACCACACTATAGTCTTCCGTTGTGGCGGTGTAAGTTGTTTCCACATAACTGTTTTTACGGGTGAGGTCTGTGAAACTGGTGTGAAAAATTATTTGAAGAAAGTTAAAGGGAGGGAACCGCTGACGAAGGGTCCCTTTGAACATTTTCCCATTGAGTTGGCTTCTTTTCATATCAAAAGAAATATTCTGGATTTGCATGCTGGTTTTGCGGAATATCTTCGCCAAACAAGATTCAAATACGTTACCCTCCATGGACCACTACACAATGTTAGGTGCAAAGTTGTTAGAGGAAGGTTTCCTTCCACAAACATCAAGCTTGGCATGGGATGGAAAAAATTTTGTAGTCTTCATTCCTTCCGTGAAGACGACAAAATTATATTTGAATGTCATATGATGATGCCTTCTGAGGATATTAGGGTTCTGCTGCTCATGAAATGTCACTACAAAAGAGAGTCCATAACCTATAATTAG 1626 0.3856 MAPSAEEIVKLDTLGLFCSMNIRGELGYVDHAFAINFQKELGEQWTLADSAGNVHTVEYNQDLLSPEIMTGWWTLADFYGFEGDHTILFRYVGQNAFHITVYMEDIPEIYFNRYLDEVEGRKPLTIGPFHHFSIKLSSVDLNGISLGIPPAFSEYLRQGTFQTVTLHGLLKEVECKVLKGRFPYRTIKIGSGWKNFCRSHSFHEGQKIIFECDSRNPSSHIRVLLLMTKPLFGFQESTFVVLATIKHIVANDEWWYTACLCNKAVYPDSKMFFCEKCNKHVMKVQPRYKLKVRVMDETDSTTFVLFDRDATTLINKSCAELFESNDKNGIVDRAFAVEFQGELSKEWTLANSAGNIHKVYYNQNILAPEIFYGWSALSSFYGLKGDHTIVFRCGGVSCFHITVFTGEVCETGVKNYLKKVKGREPLTKGPFEHFPIELASFHIKRNILDLHAGFAEYLRQTRFKYVTLHGPLHNVRCKVVRGRFPSTNIKLGMGWKKFCSLHSFREDDKIIFECHMMMPSEDIRVLLLMKCHYKRESITYN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02415 541 CDD B3_DNA 130 224 IPR003340 GO:0003677
Phac7g02415 541 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 149 274 IPR044837 -
Phac7g02415 541 Gene3D - 227 364 IPR012340 -
Phac7g02415 541 SUPERFAMILY Nucleic acid-binding proteins 236 347 IPR012340 -
Phac7g02415 541 SUPERFAMILY DNA-binding pseudobarrel domain 128 216 IPR015300 -
Phac7g02415 541 SUPERFAMILY DNA-binding pseudobarrel domain 31 109 IPR015300 -
Phac7g02415 541 SUPERFAMILY DNA-binding pseudobarrel domain 330 410 IPR015300 -
Phac7g02415 541 CDD RPA1_DBD_C 239 348 IPR047192 -
Phac7g02415 541 Gene3D - 417 527 IPR015300 -
Phac7g02415 541 Gene3D - 124 226 IPR015300 -
Phac7g02415 541 SUPERFAMILY DNA-binding pseudobarrel domain 433 514 IPR015300 -
Phac7g02415 541 Pfam Replication factor-A C terminal domain 239 329 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02415 Phac-Chr7 28241731 28249307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02415 189 348 Core DNA Replication Machinery Family AT5G08020 30.909 9.56e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02415 - - pvu:PHAVU_010G054900g 335.495