Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02408 ATGGCTGCTCAAGGACAAGTCATTACCTGCAAAGCCGCGGTGGCCTGGGAACCCAACAAGCCATTGACCATCGAGGACGTTCAGGTGGCTCCGCCGCAGAACGGAGAGGTCCGAATCCAAATTCTCTACACTGCTCTCTGTCACACCGATGCTTACACGTGGAGCGGCAAGGATCCAGAAGGTCTTTTTCCATGTATACTCGGTCATGAGGCTGCAGGAATTGTGGAAAGTGTTGGAGAAGGAGTCACTGAAGTTCAGCCTGGTGATCATGTGATCCCTTGTTACCAGGCTGAGTGTGGAGAGTGCAAGTTTTGCAAATCAGGGAAAACCAATCTGTGTGGCAAAGTTCGATCTGCAACTGGAGTCGGGGTCATGCTGAGCGATTGCAAGAGTCGTTTCTCAGTTAATGGAAAACCCCTCTATCATTTCATGGGAACCTCCACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGATCCCAAAGCTCCTTTGGAGAAAGTTTGTCTTCTTGGATGTGGTGTTCCAACTGGTCTTGGAGCTGTCTGGAACACTGCAAAGGTGGAAAAGGGGTCAATTGTTGCCATTTTTGGCCTAGGAACTGTCGGGCTTGCTGTAGCAGAGGGTGCAAAAGCTGTTGGTGCATCACGGATTATTGGCATAGATATTGATAGCAATAAGTTTGAAAGAGCAAAGAACTTTGGAGTCACCGAATTTCTTAATCCAAAAGAACATGAGAAACCAATTCAGCAGGTCATAGCTGATCTCACAGATGGTGGAGTTGATTATAGTTTTGAGTGTATTGGAAATGTCTCTGTGATGAGAGCTGCTTTGGAATGCTGCCATAAGGGTTGGGGGATATCAGTTATTGTGGGGGTTGCAGCATCAGGTCAGGAAATATGTACTCGACCTTTCCAGTTGGTGACTGGGCGAGTATGGAAAGGAACAGCATTTGGTGGCTTCAAGAGCCGATCACAAGTGCCTTGGCTTGTGGAGAAGTACATGAAGAAGGAAATCAAGGTTGATGAGTACGTCACCCACAACTTGCCTCTTGCTGAGATCAATAAGGCATTTGACCTCATGCATGAAGGAGGATGTCTCCGTTGTGTGCTTGCAATGCATGAGTGA 1140 0.4693 MAAQGQVITCKAAVAWEPNKPLTIEDVQVAPPQNGEVRIQILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECGECKFCKSGKTNLCGKVRSATGVGVMLSDCKSRFSVNGKPLYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEKGSIVAIFGLGTVGLAVAEGAKAVGASRIIGIDIDSNKFERAKNFGVTEFLNPKEHEKPIQQVIADLTDGGVDYSFECIGNVSVMRAALECCHKGWGISVIVGVAASGQEICTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYMKKEIKVDEYVTHNLPLAEINKAFDLMHEGGCLRCVLAMHE* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02408 379 PANTHER ALCOHOL DEHYDROGENASE 5 375 - -
Phac7g02408 379 Pfam Zinc-binding dehydrogenase 206 327 IPR013149 -
Phac7g02408 379 SUPERFAMILY GroES-like 3 197 IPR011032 -
Phac7g02408 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 341 IPR036291 -
Phac7g02408 379 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 377 IPR014183 GO:0006069|GO:0008270|GO:0051903
Phac7g02408 379 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Phac7g02408 379 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
Phac7g02408 379 CDD alcohol_DH_class_III 8 375 IPR014183 GO:0006069|GO:0008270|GO:0051903
Phac7g02408 379 SUPERFAMILY GroES-like 326 375 IPR011032 -
Phac7g02408 379 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Phac7g02408 379 Gene3D - 182 320 - -
Phac7g02408 379 Gene3D - 13 372 - -
Phac7g02408 379 FunFam S-(hydroxymethyl)glutathione dehydrogenase 13 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02408 Phac-Chr7 28152235 28159548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02408 10 363 Monolignol Biosynthesis Gene Families AT1G72680 25.000 8.80e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02408 K00121 - gmx:100793008 739.954