Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02407 ATGGCGCTGTGGATGGAAAAGGGCTCGGAGCCCTTAACAGAAAGCGAGAAGGCTGACCTTGAAGCCATTGCTGCAGTCAAAGAGTCTACTGCTTTTGAATTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTACTCTGATGCCATTGATTGCTACACAAGGGCAATTGATCAGAAGGCCTTGAGTGACTCTGAGACCTCTATTCTTTTTTCAAATCGAGCCCATGTGAATTTGCTGCTAGGAAATCTTAGACGTGCTCTCCTAGATTCTCAAGATGCCCTCAAGTTGTGCCCTTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCTTCCCTTTCACTAAATATGTTGGCTGAAGCAAGAGAGTATTGCCTGAAGGGTCTTCAGTTTGACCCCAATAATGAGGATTTGAAGAAGCTTGACAGACAGATTGGTTTGAAGATATCAGAGAAGGAAAAGCATGAGGCTCAAGTCTTGAAGGATGCTGCAGAGACAAAGGAACTTGTGTCTGCAATAGAATATAGAGGCTTGAAGATCGGAAAGGCAATGTATCGAGAACTTACTGGATTAAGGAAACCTGTGTTGGATAAAAGCAATATCCTTCATTGGCCTGTTGTTCTTCTGTATGCAGAGGTTATGTCTAGTGACTTCATTGAGGATTTCTGCGAGACTGATATGTTTTCTGTTCACCTTGATATGATATTTGCAGAAGATCAGCCTTTGTCATGGGATGTTGAAAACAACTACAGACGTGAATTTATTGAATTATACTATGAGGCTGGTTCTGGACTTTGTCTATCAAAGGAAAAACTTCTTGATTGTCTATTAGAAGGAACTGCAGCTTTTCAGAGTGATGGTGTTGGTGATGAAGAGAAAGACGCAGATGAGGATTATAAGCAACAAACGGGTTCCCCAAAATGGATCAAAGTGAATGAAAGGAGGACACTCCACGATGTTCTCAAAGAGCCTAATTTCATCATTCCTGGTATCCCAGTCTTCTATGTTCTTTCGAAGCGGTCCAGCTTTTACAGCAAGTTTAAAGCTGGAAAGTGGGCTCCTCCAATTGTATGA 1083 0.4164 MALWMEKGSEPLTESEKADLEAIAAVKESTAFEFKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALSDSETSILFSNRAHVNLLLGNLRRALLDSQDALKLCPSNIKAIYRAAKASLSLNMLAEAREYCLKGLQFDPNNEDLKKLDRQIGLKISEKEKHEAQVLKDAAETKELVSAIEYRGLKIGKAMYRELTGLRKPVLDKSNILHWPVVLLYAEVMSSDFIEDFCETDMFSVHLDMIFAEDQPLSWDVENNYRREFIELYYEAGSGLCLSKEKLLDCLLEGTAAFQSDGVGDEEKDADEDYKQQTGSPKWIKVNERRTLHDVLKEPNFIIPGIPVFYVLSKRSSFYSKFKAGKWAPPIV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02407 360 CDD CTWD_Cns1-like 170 352 - -
Phac7g02407 360 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 357 - -
Phac7g02407 360 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Phac7g02407 360 SMART tpr_5 31 66 IPR019734 GO:0005515
Phac7g02407 360 SMART tpr_5 71 104 IPR019734 GO:0005515
Phac7g02407 360 SMART tpr_5 105 138 IPR019734 GO:0005515
Phac7g02407 360 Coils Coil 150 170 - -
Phac7g02407 360 Pfam Cns1/TTC4 Wheel domain 201 267 IPR044059 GO:0051879
Phac7g02407 360 SUPERFAMILY TPR-like 24 156 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02407 35 161 Calmodulin-binding Proteins AT3G25230 31.884 6.45e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02407 K24927 - gmx:100783179 652.899