Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02364 ATGCAGACACAAGAGGAATTACAAGAGGTTTCCAAGGATCAGATGATGATCAAAGGCAAGCGCAACAAGCGTGAAAGGGCACCATCCCCTCCTAGGTTTGCCAAGCCCACTTCAACCTCAACTAGCACTAACAATTCCATTGATAGTGCCACAACCTCAACCACCACCAACACCCCAATTGAATCAATAGAAGAAGAAGACATGGTGAATTGTCTCATTCTCCTAGCTCAAGGCACACACCACGTGGCAGCAGCTACATCAGATCAAAACATCAACTACAAAAAGTCAACAAACCCTCGAGTCTTCCGGTGCAAGACTTGCTACAAATGCTTCCCTTCATTCCAATCGCTTGGAGGACACAGAACCAGCCACAGGAAGCCCAAGGACAACAGAACTGCTGTAGAAGAAGCTCCTACTTTTATTAGAGACAGTGATCCCACCACAAGCACCACTCTCTCCTTGAAAACACCAAATAGGGTTAATAGTTTGACTAGCACCAGCACTGTCGCCGTGAGAGTTCACCGGTGTTCCACCTGTTATGCTGAATTCTCTTCTGGGCAAGCCCTGGGAGGCCACATGAGGCGCCACAGAAATCTTGTGAATGCTTCTTCAATGACGTCCATGAGTGGTGATGGTGGTGGTAGCCAAGAATATCAAGGAGCTAAGAAACCCTTGAATTTGGACTTGAATCTTCCAGCAGCACCAGAGGAAGATCAAGGAGAATCCAAGTTTTCGTTTCAGCAAAGAGAAAACGTCATTGTCTTCTCTAATTCTTTGGTGAATTGCAATTACTGA 795 0.4616 MQTQEELQEVSKDQMMIKGKRNKRERAPSPPRFAKPTSTSTSTNNSIDSATTSTTTNTPIESIEEEDMVNCLILLAQGTHHVAAATSDQNINYKKSTNPRVFRCKTCYKCFPSFQSLGGHRTSHRKPKDNRTAVEEAPTFIRDSDPTTSTTLSLKTPNRVNSLTSTSTVAVRVHRCSTCYAEFSSGQALGGHMRRHRNLVNASSMTSMSGDGGGSQEYQGAKKPLNLDLNLPAAPEEDQGESKFSFQQRENVIVFSNSLVNCNY* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02364 264 Pfam C2H2-type zinc finger 173 197 - -
Phac7g02364 264 Pfam C2H2-type zinc finger 101 127 - -
Phac7g02364 264 ProSitePatterns Zinc finger C2H2 type domain signature. 176 196 IPR013087 -
Phac7g02364 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 196 IPR013087 -
Phac7g02364 264 MobiDBLite consensus disorder prediction 1 63 - -
Phac7g02364 264 PANTHER ZINC FINGER PROTEIN ZAT5 26 248 - -
Phac7g02364 264 SMART c2h2final6 102 124 IPR013087 -
Phac7g02364 264 SMART c2h2final6 174 196 IPR013087 -
Phac7g02364 264 MobiDBLite consensus disorder prediction 11 30 - -
Phac7g02364 264 SUPERFAMILY beta-beta-alpha zinc fingers 100 196 IPR036236 -
Phac7g02364 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 129 IPR013087 -
Phac7g02364 264 MobiDBLite consensus disorder prediction 33 63 - -
Phac7g02364 264 ProSitePatterns Zinc finger C2H2 type domain signature. 104 124 IPR013087 -
Phac7g02364 264 Gene3D Classic Zinc Finger 76 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02364 Phac-Chr7 27527676 27529253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02364 5 264 C2H2 Transcription Factor Family AT5G03510 35.395 2.72e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02364 zf-C2H2_6 2e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02364 - - pvu:PHAVU_007G151700g 457.988