Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02363 ATGGCGCTCCGCACCTTCATAGTCCGTAGGACCCAAGACGACATTCACAGCGACACTTGGAGAGCCGCTCTCTCCGAATTCATCTCCACATTCATCTTTGTCTTCGCTGCCTCCGGCTCCACCATCGCCGTCAAAAACCTCAGCGCCGACGCGCCCACCGCTCTCGTCATCGTCGCCGTTGCCAACGCCTTCGCCCTCTTCGCAGCCGTCTCCGTCAGCACAAACGTCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGGCTTTTTCGTCGGCGGCAACCTTACCTTGCTCCGCTGCATCCTCTTCTGGATCGCTCAGATCCTCGGCTCCGTCAGCGCTTGCTTGCTTCTCAAATTCACCTCCGGCGGACAGAGAGTACCGGTTTACGGACTTTCGAGTGGTGTGAAAGTGGGAAACGCTTTGGCATTGGAGATGGTGATGACCTTTGGATTGGTGTACGCGGTGTATGCTACCGCCGCTGACCCCAGGAGCAGAAGGAATAGTTTGGGAACGATAGCGCCAATTGTGATTGGCTTAATCGTTGGAGCGAATATTTTGGTAGCTGGGCCTTTTGATGGGGGCTCCATGAACCCGGCAGCGTCGTTTGGGCCTGCACTGGTGGGCTGGAACTGGGAAAACCATTGGGTTTACTGGGTTGGGCCTCTCGTTGGTGGTGGGCTTGCTGGGTTTCTTTATGAGTTGGCTTTTGTTAGCTTCACCCGTCAGAGGTTCCGCAGAGATTACCGTAATTATTTTTGA 762 0.5604 MALRTFIVRRTQDDIHSDTWRAALSEFISTFIFVFAASGSTIAVKNLSADAPTALVIVAVANAFALFAAVSVSTNVSGGHVNPAVTFGFFVGGNLTLLRCILFWIAQILGSVSACLLLKFTSGGQRVPVYGLSSGVKVGNALALEMVMTFGLVYAVYATAADPRSRRNSLGTIAPIVIGLIVGANILVAGPFDGGSMNPAASFGPALVGWNWENHWVYWVGPLVGGGLAGFLYELAFVSFTRQRFRRDYRNYF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02363 253 CDD MIP 21 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 Gene3D Glycerol uptake facilitator protein. 5 245 IPR023271 -
Phac7g02363 253 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Phac7g02363 253 Pfam Major intrinsic protein 17 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PANTHER AQUAPORIN-8 13 239 IPR034294 -
Phac7g02363 253 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02363 253 FunFam Probable aquaporin TIP1-1 4 249 - -
Phac7g02363 253 SUPERFAMILY Aquaporin-like 15 243 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02363 Phac-Chr7 27516661 27518949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02363 1 249 Major Intrinsic Protein MIP AT2G36830 60.870 3.68e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02363 K09873 - gmx:100820403 389.808