Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02339 ATGGATCGTGAAGAATATTTGCGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACAATCTTGCTTTCCAGGATGGTAGTTTGGATTCTCATACAACTTTGAACGGAAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTTGAAATCGATGATCTTGAAGGAGCTGATGGTTTCCCTGGTGCATGTGAAGAATATTTTTTGGATTTTGAATTTGCTGACAAATTTGAGGAGGTACTAGGTTCTGGTCCTTTTGAAGGTTCACTCTTTCAAAACTCAAGTTCGGAAAGTCATTCTTCAGGATTAAGTAGAAGTAGCATTGTTGGTGGGGTATTAGAATCAACAAAAGTACCTACTGCACAATCTGAATGCAAAAATGATTCTCTAGATGAGACAGTAACCTATGAATCACATGGTGCCTTCAGCAACAATCCTAGTCAACCATCAAAAGGAAATTGTAGGTACAACATTTCACTTGATATGCAACATCTGCAAGAGTTGGATAACTATCGTCATTTAGCTGGTGGTATACTGACTTGTAAGAAGGATAAGGGTTCTGTCGAAAAAGGCCAACCTGCTGCACTTAGAGAGAAAAGATTCCGAAAGCCTACGCAGAGGTATATTGAAGAATTTTCAAATGCGAGCTCAAAGGAAAAGGTACCACCTGCTGGTACAAAAACTAAACATTCCAGTGATTCATCATGTAATGTACTTCATATAAGGATTAAATCATTGAAAAAGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGAGGTAATGCTTCCTGAGATGCAAGTTCGGAAAGGACGTCAGGAGAAAGAGAAACTTCAGTACGAGTATGAATCATTTCCCTCGGAATCTGAGGATGGATGTTCAACGACAAAAAAATCGAGAAGAAAAGATAGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTTTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGTTGGACTGATATTAAGAAGTTTTTGTTTTCTTCTTCAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGTGCAGAAAAACAAGAAAGAGGCTGATCAAAATGACGAGTTTGCCCTGCGTCCCTTACCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTGTTAGCCAAGCTGGCTCTTCTGTCGTTGCAGATTCTCCTCCCGTTAGTCTTAGCAAAAGAAATGTACGTAGAAAGTTTACTTAG 1392 0.4016 MDREEYLRKCSNMKCQRVQVDESYVPALQDEVMEVEHLLAEPRNNLAFQDGSLDSHTTLNGKDDLELEVLDGLLDDVEIDDLEGADGFPGACEEYFLDFEFADKFEEVLGSGPFEGSLFQNSSSESHSSGLSRSSIVGGVLESTKVPTAQSECKNDSLDETVTYESHGAFSNNPSQPSKGNCRYNISLDMQHLQELDNYRHLAGGILTCKKDKGSVEKGQPAALREKRFRKPTQRYIEEFSNASSKEKVPPAGTKTKHSSDSSCNVLHIRIKSLKKSPSEKSSNENSEVMLPEMQVRKGRQEKEKLQYEYESFPSESEDGCSTTKKSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKKFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKKEADQNDEFALRPLPFNVVHRVRELAKIHPYPRQRGSKKLRVSQAGSSVVADSPPVSLSKRNVRRKFT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02339 463 MobiDBLite consensus disorder prediction 239 263 - -
Phac7g02339 463 MobiDBLite consensus disorder prediction 295 312 - -
Phac7g02339 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 330 390 IPR017930 -
Phac7g02339 463 Gene3D - 324 437 - -
Phac7g02339 463 SUPERFAMILY Homeodomain-like 338 404 IPR009057 -
Phac7g02339 463 MobiDBLite consensus disorder prediction 428 451 - -
Phac7g02339 463 MobiDBLite consensus disorder prediction 435 450 - -
Phac7g02339 463 CDD SANT_TRF 337 387 - -
Phac7g02339 463 MobiDBLite consensus disorder prediction 275 335 - -
Phac7g02339 463 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 437 - -
Phac7g02339 463 SMART sant 335 388 IPR001005 -
Phac7g02339 463 Pfam Myb-like DNA-binding domain 338 386 IPR001005 -
Phac7g02339 463 ProSiteProfiles Myb-like domain profile. 331 386 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02339 Phac-Chr7 27182439 27191001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02339 337 386 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 2.93e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g02339 Myb_DNA-binding 9.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02339 - - gmx:100810255 750.355