Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02320 ATGATTGCTTCAAGGCATATTTTGCGCCTTGTTTCCATTTTCCAGTACCTCTTGAGGTTGTATCTTATTTATCCTCTATCATCTGAAATCGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCTAGTCATGTTTTAGGATCCTCTTGGTACCTGTTGTCAATTGAACGCCAGAATGAATGTTGGAAGAAAGCTTGTGCACTGCAGCACCCACTTTGCCAGTATCATTATCTTGATTGCCAAAGCATCGCTGACCCAAATAGGATTGCTTGGTTAAGATCAAGCAATCTCTCAAGCCTATGTGATCAGAACAGTGATTTCTTTCAATTTGGCATTTTTACTGATGCTCTAAATTTGGAAGTTACAGCCTCAAAATTCTTCAACAAGTACTATTACTGTCTGTGGTGGGGACTAAGGAATCTAAGCTCTGTGGGACAAAATCTCTTAACAGGCACACGTGTTGCAGAGATCAATTTTGCTGTAATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTACTCATTGGCAATATGCAAACCTACTTGCAATCCACCACTACGCGGCTAGAAGAATGGAGAATAAGAAGAACAGATACGGAAAGATGGATGCATCACAGGCAACTCCCTCGTTACCTGAAGCAAAATGTGCGACGTCATGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAAGAAACTATTCTCAGAGACCTTCCCACAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTTAATCTCGTTCGACAAGTACCACTGTTTGATCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTTCTCTTTTCACTCCAGGGGCTTGTGTGGTTCGCGAAGGTGATCTTGTGAATGAGATGCTTTTCATTGTTAGAGGACGCCTAGATTCTTGCACCACCAATGGTGGCAGAACAGGTTTCTTCAACTCATGCAGACTTGGCTCTGGTGACTTCTGCGGTGAAGAGCTTCTGCCATGGGCTTTGGATCCTCGTCCAACGGTTGTCCTTCCTTCCTCAACTCGCACAGTGAAAGCTATCACTGAAGTGGAAGCCTTTGCACTCATTGCTGAGGACTTGATGTTTGTGGCAGCACAGTTCAGAAGGTTGCACAGCAAACAACTGAGGCATACTTTTAGGTTCCACTCCCATCAGTGGAGGACTTGGGCTGCATGCTTCATACAAGCAGCATGGTTCAGGTATAAGAGAATAAAGGAGACAAGTGAGCTCAAGAGAAAGGAGAACATGATGATGGCCTTTCTGCCTGGAACTGGCACTGAACATTTCTCTGCACCTCTGCAGGCTCCTATGGGCACAATGTATGCTTCAAAACTAGCATTCAGCCCAAGGAAAGGTAGAAGCCTGAGATACGGGCCTGAACTTGACATTCTTGGCTCACTGAGGAAGCCCCTTGAACCAGACTTTACTGATGATGATGATGATGACAGTTGA 1521 0.4458 MIASRHILRLVSIFQYLLRLYLIYPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLSIERQNECWKKACALQHPLCQYHYLDCQSIADPNRIAWLRSSNLSSLCDQNSDFFQFGIFTDALNLEVTASKFFNKYYYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPTDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGACVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNSCRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAEDLMFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELKRKENMMMAFLPGTGTEHFSAPLQAPMGTMYASKLAFSPRKGRSLRYGPELDILGSLRKPLEPDFTDDDDDDS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02320 506 Gene3D Helix hairpin bin 200 265 - -
Phac7g02320 506 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 474 - -
Phac7g02320 506 SUPERFAMILY Voltage-gated potassium channels 15 237 - -
Phac7g02320 506 SUPERFAMILY cAMP-binding domain-like 203 396 IPR018490 -
Phac7g02320 506 CDD CAP_ED 274 405 IPR000595 -
Phac7g02320 506 ProSiteProfiles cAMP/cGMP binding motif profile. 274 359 IPR000595 -
Phac7g02320 506 FunFam Cyclic nucleotide-gated ion channel 1 272 390 - -
Phac7g02320 506 Pfam Ion transport protein 15 201 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac7g02320 506 Gene3D Jelly Rolls 272 392 IPR014710 -
Phac7g02320 506 Gene3D - 2 198 - -
Phac7g02320 506 SMART cnmp_10 274 405 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02320 Phac-Chr7 26840830 26844525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02320 1 501 Ion Channels AT2G28260 64.072 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02320 K05391 - gmx:100815543 974.541