Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02308 ATGGAGATCACGAGCAGCAATAGCAGCTGCAGCAGCATGATGTGGTTTTTCAAAGATAAAGGGTTTGATGAGAACAGTGTGCAAGGAATTTTCCGACGGTGTAGGCGCCTTGAGGATGTGCATCAGGACAGAGCAAGTGAAAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGAAAGTTGCCCACAATTGTTTCAAAATGCCCCAAGATTCTTGTGCTGGATCTTTATGACAAGATTATGCCCACGGTTGAGTGTCTCAGGACTCTGGGAACAAAACCACGTGAGGTTGCTACTGCCATAGCCAAGTTCCCTCACATACTCTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCCTTCTTTCAGGCTTTGGGTATCCCTGAAAAGCATATTGGGAAAATGATACTGCTCAACCCTAGGCTTATAAGCTACAGCATTGAAACAAAGTTGACTGAAATTGTGAACTTTCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATCGGAAAAGTTATAGTTAAGGACCCCTATATTATGGGTTATAGTATTGAGAAAAGACTCCGCCCTACTTCACAGTTCCTCAAGTCAATAGGTCTGAGTGAGCAGGATCTTCAAGCAGTGGCTGTGAACTTCCCAGCAATCTTGAGTAGAGATGTGAACAAGCTTTTGGTACCCAATTATACGTATCTAAAGAGGCGTGAATTTCAAGACAAACAGATAGTTGCTTTGGTGGTTGGTTTTCCTCCTATCTTGATCAAGAGCATCCAGAATTCATTAGAACCAAAGTTCAAATTTTTAGTAGATGTGATGGGAAGACAAGTTGATGAAGTTGTTGATTATCCTTGTTTCTTTCATCATGGCCTCAAGAGAAGAATAGAGCCACGGTACAAACTTCTAAAGGAGAGGAATTTAAATTGTAGCTTGAGTGAAATGTTGGATTGCAATAAGAAGAAGTTCTTCATGAAATTTGGCTTGTTAGAAGGACATGCCTTGTGTAACTAG 1011 0.4125 MEITSSNSSCSSMMWFFKDKGFDENSVQGIFRRCRRLEDVHQDRASENWEYLRSIGIEERKLPTIVSKCPKILVLDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQALGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLASLGLNKDGMIGKVIVKDPYIMGYSIEKRLRPTSQFLKSIGLSEQDLQAVAVNFPAILSRDVNKLLVPNYTYLKRREFQDKQIVALVVGFPPILIKSIQNSLEPKFKFLVDVMGRQVDEVVDYPCFFHHGLKRRIEPRYKLLKERNLNCSLSEMLDCNKKKFFMKFGLLEGHALCN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02308 336 Pfam mTERF 14 114 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 Pfam mTERF 95 322 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Phac7g02308 336 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 98 330 - -
Phac7g02308 336 Gene3D Transcription termination factor 3, mitochondrial 104 330 IPR038538 -
Phac7g02308 336 PANTHER CGI-12 PROTEIN-RELATED 133 254 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02308 Phac-Chr7 26796817 26798842 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac7g02308 mTERF 1.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02308 K15032 - gmx:100816929 601.668