Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02298 ATGGGAAGAGCTCCTTGCTGTGACAAGGCCAATGTAAAGAAAGGGCCATGGAGTCCTGAAGAAGATGAAAAGCTAAGAGGGTTCATAGAGAAACATGGTACCGGAGGAAACTGGATTTCCCTCCCACATAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTGAGATGGCTTAATTATCTGAGGCCGAACCTTAAGCATGGAGAGTTTTCTGAAGGTGAAGATAGAATAATATGTACTCTCTTTGGTAGCATTGGAAGCAGGTGGTCCATAATAGCATCTCAGCTGCCAGGCAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGCTTAAGAAAAAAATGGTGGGGACAATGAACCCTTCAGCACTGAAGAAGCCTCACCAAGTTACCCTTTCATCCATGCTTCAAAACTCAACATCCTCTTCATCCTCCTCCTCATCTTCATTATCATTAAAAAACAATCACAACTCGAACTATCAACAACCCTATGTGCCTTTCACAGGCTCTGAGGCCATTTCATACGCAAGTCTTCTGAGTGGCAATTCTTCTTCTACTCCAGCTTGTTCCAGTTTTGAGAGGCTTTACCAAGTTAACTGTGGTTTTATGTTAGGGGGTGAAACAAGTTGCAGCTCTTCTTCAGATGGAAGCTGCAAGAAGAATCAGATGAATGATGTGAAAGAAGGAGAAGTTGGATATGTTGGTGTTGGAGGTTTTGGTGACCAAATAGGTGGCCTTAGTTACCTCTCTAGTGGGGTGGAAGATACCCAAAAGTTGGTGTCCTCCAATGCTGGTAGGGCTAGTGGGTGGACAGGTGAAGAAAGTCCATTAGACTATGGTTTAGAAGAAATTAAACAGCTAATGAGCACAAGTAGTTGCAACAACTTTATGTTTGATGACAGCAAGACAGGGGAAATGGTGATGTACTACTGA 939 0.4313 MGRAPCCDKANVKKGPWSPEEDEKLRGFIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNLKHGEFSEGEDRIICTLFGSIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMVGTMNPSALKKPHQVTLSSMLQNSTSSSSSSSSSLSLKNNHNSNYQQPYVPFTGSEAISYASLLSGNSSSTPACSSFERLYQVNCGFMLGGETSCSSSSDGSCKKNQMNDVKEGEVGYVGVGGFGDQIGGLSYLSSGVEDTQKLVSSNAGRASGWTGEESPLDYGLEEIKQLMSTSSCNNFMFDDSKTGEMVMYY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02298 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Phac7g02298 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Phac7g02298 312 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac7g02298 312 MobiDBLite consensus disorder prediction 129 157 - -
Phac7g02298 312 PANTHER OS09G0431300 PROTEIN 1 228 - -
Phac7g02298 312 CDD SANT 16 62 IPR001005 -
Phac7g02298 312 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phac7g02298 312 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac7g02298 312 Gene3D - 70 161 - -
Phac7g02298 312 Gene3D - 7 68 - -
Phac7g02298 312 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac7g02298 312 SMART sant 67 115 IPR001005 -
Phac7g02298 312 SMART sant 13 64 IPR001005 -
Phac7g02298 312 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac7g02298 312 FunFam Transcription factor RAX3 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02298 Phac-Chr7 26717984 26720281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02298 1 131 MYB Transcription Factor Family AT2G36890 76.336 1.23e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g02298 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02298 K09422 - gmx:100820139 425.631