Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02274 ATGACAGATTTTCAGCCGCTACAGCAGAAACCCGAGCCTGCTGATTCCCATGCCGGGTTTGAGAGGGGAATAGAGGAGTATATGCGTGGGCACTTGGATGAGTGTATGTCGTTTGCTTCATGTAGCTCCTCCCGCGCACCTGATGATGAGGATGACGAGAGCGAACAGCTGGTTCGGAGGAGACGGAGGTCTGACCTTGAAGGAGATGATTTGGCAGAGTCCTCGGCTGCACGCCGGCGGCATTCAAGGATTTTGAGCAGATGGGCTGCACGGCAAGCACAAGAAATGATAACTACTATTGAGAGGAGGAATCGAGAGTCTGAGTTGATGGCACTTGCGGGTTTGCATACAGTGTCGATGTTGGATTCTTCTTTCCTGAGGGGCTCACAGTCTCCGACTTCTGGCCAGGAGGGGGCTGTGGAGAGGCCAAGCACTCAGGCATCTGCCATTTTGCAGATGTGGCGTGAGTTGGAAGATGAACATTTGTTGAACCGGGCACGAGAAAGGATGAGGGTAAGGTTGCGGCAGCAGAGGAATTCGGACTCTAATACCAATGTGTCCAGTACCATGTCTGATAGTCGAGGCAGTGAGAATCATGGGAGTTTGGGGGATGCAAGTGAAAGTGAAAATGATTATGGTACTTGGTCACATGATCAGATTGGGTCGAGGAATGCACACGGGGATCGTAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTTCGGGGGTGGATGGAAAGTGGCATTAGTGATCATTCATCCAATGTGAGTCAGCGAAGCAATAACCGGAGAGCAGAATGGCTTGGAGAAACAGAGCGTGAGAGGGTAAGAATAGTCAGGGAATGGGTGCAAATGACTAGCCAGCAGAGAGGTTCGCGGGGGAGCCGTAGGGATTCTCAAGTAAGTGAAGGTGCTCAAGCTGATCCAGTCCGTGATGTAGCTGACAATGATGAGAGTCAGCCAGAGCATGTTCGGCGGGACATGTTGAGGTTCCGTGGAAGACAGGCTCTAGTTGATTTGCTTGTGAGGATAGAAAGGGAAAGACAAAGAGAACTGCAGGGATTGTTGGAGCATCGAGCTGTTTCTGATTTTGCTCATCGCAACCGTATTCAGTCACTGCTTAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGGCCACCATCTATGGCTGCAAGTGAATTAGTTCAGCTAAGACAACGGCATACAGTCTCTGGTTTAAGGGAAGGGTTTCGTTCAAGATTAGAAAATATTGTTCGTGGTCAAGCAGGCACCAATCCTGATACCACGTCAAATAGTAATGCCTCTGAAACAAGAGGGGATGAAACCCAAGCAAACAGTCTGGTAGATAGCCAACAAGAAAATTATGAACAACAGCAGATTAGGAACCTGGAAACTGATCTGCGTCAGTTGCCTAATGGAACAGTAACTTTGGAGAGTAGCACAAATGAGAGTATTAGTTGGCAAGAAACTAATAACCAAGGAGGGAATTGGCAGGAACAAATTGCTGAGGAAGGGGGAGGAAACTGGCAACAGAGTCCATTCAATCAGACGAGAGATGGAAGGGCAGTCAGTGATTGGCCACAGGAACCTCCCAGAAATTTAGCTGGGGAAGATCCTCATCCAAGGGAATCTCAAAGAATTTGGCACGAGGATAACACAAGGGAAACTGCTGCCAATTGGTCCGAAGGATCTTCTGGAGTTTCGAGGAATCACCGTGGGGTTCCTGTTAGAAGATTCAATAGATTTCATCCACCTGATGATGATAATGTATACAGTATGGAGCTTAGAGAACTTCTGAGCAGGAGAAGTGTTTCTAATCTTCTACGCAGTGGTTTCCGTGAAAGTCTGGACCAACTAATACAGTCATATGTGGAAAGGCAAGGTCGTGCACCAATTGACTGGGATTTGCATCGGAACTTGCCAACATCAACTCCTGCTTCACCTGAACGGGACCCAGACCAGCAGGCTGGCGAACGAGATGAGGGTCAGCGTGAAACAATTAACAGACCTTCACTGGTGTTGCCATCTCCACCAGTGCCTCCGCCACAACCTCTGTGGCACCAGGATTTACATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATTGAGTGGGAGATAATGAATGATTTAAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAAAGGATGTTGGAGGCCTGCATGGATATGCAACTGGAGTTGCAGCGCTCTGTCAGACAGGAAGTATCAGCAGCTCTGAACCGCTCAGCGGGTGAAAACGGATTGGGTGCTGAGACATCTGATGATGGGTCTAAATGGGGGCATGTGAAAAAAGGAACTTGCTGTGTTTGTTGTGATAACCATATCGATTCTCTTTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAGTTAATTCGTGGTGGTGGTAAGTGTCCTTTATGCCGAGCACCAATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2547 0.4814 MTDFQPLQQKPEPADSHAGFERGIEEYMRGHLDECMSFASCSSSRAPDDEDDESEQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARERMRVRLRQQRNSDSNTNVSSTMSDSRGSENHGSLGDASESENDYGTWSHDQIGSRNAHGDRNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNVSQRSNNRRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDSQVSEGAQADPVRDVADNDESQPEHVRRDMLRFRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQLRQRHTVSGLREGFRSRLENIVRGQAGTNPDTTSNSNASETRGDETQANSLVDSQQENYEQQQIRNLETDLRQLPNGTVTLESSTNESISWQETNNQGGNWQEQIAEEGGGNWQQSPFNQTRDGRAVSDWPQEPPRNLAGEDPHPRESQRIWHEDNTRETAANWSEGSSGVSRNHRGVPVRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPTSTPASPERDPDQQAGERDEGQRETINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLGAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELIRGGGKCPLCRAPIVEVVRAYSIL* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02274 848 MobiDBLite consensus disorder prediction 173 275 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 433 470 - -
Phac7g02274 848 Coils Coil 725 745 - -
Phac7g02274 848 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 110 848 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 521 587 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 40 78 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 649 696 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 125 146 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 667 681 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 177 221 - -
Phac7g02274 848 ProSiteProfiles Zinc finger RING-type profile. 796 835 IPR001841 -
Phac7g02274 848 SUPERFAMILY RING/U-box 795 841 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 550 571 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 222 252 - -
Phac7g02274 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 780 846 IPR013083 -
Phac7g02274 848 Pfam Zinc finger, C3HC4 type (RING finger) 793 840 - -
Phac7g02274 848 CDD mRING-HC-C3HC5_NEU1 793 845 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 52 78 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 259 275 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 431 470 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 1 25 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 296 313 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 521 537 - -
Phac7g02274 848 MobiDBLite consensus disorder prediction 296 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02274 Phac-Chr7 26444585 26451104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02274 778 842 C3H Transcription Factor Family AT3G06140 37.879 1.61e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02274 - - gmx:100784174 1514.21