Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02267 ATGGTTTGGGAATCAAACTCTCTCCCCTTTCTACAACACAGATTCCGTTGTTTCGCCATTTGTGAAGCAGTTGTTAGGATTTGTGCTTTTGTTTCATCAAAGTTGTGGTGTGTTTTCATTATATTTTCGTCTGTGGTCGTAGGTGAAATAGCATTAAATATGAGGGGAAGAAGCTACAGTTACAGTCCTTCACCTCCAAGGCATTATAGCCGAAGAAGGCGCAGTCCCAGCCCTAGGGGTCGTTACAGAGGACGTGATAGGGATTTGCCAACTAGTCTTTTGGTTCGAAACCTTCACAGAGATTGCAGGGCGGAAGATCTGCATGGTCCATTTGGCCAATTTGGTCCTGTTAAGGACGTTTACCTGCCTCGAGATTATTATACTGGGGATCCAAGAGGTTTTGGGTTTGTCCAGTATGTGGACCCAGCTGATGCTGCGGATGCAAAATACCACATGGACGGTCAAATTCTTCTTGGTCGTGAGTTAACTGTAGTGTTTGCTGAAGAAAACAGGAAGAAACCTTCTGAAATGAGGGCAAGGGAACGGAGGAGGGATCGATCATATGATTACAGGCGATCGCCTCGAACCTATTCTCCTAGTCCAGACTATTCACCTCCTCCAAGACGAAGACGTCATTACAGATCAATCTCACCAAGGGTCAGAAAATATAGCGATGGATCATACTCTAGATCACCTTATGGGTCAAGAAGCCGCAGCAGAAGCAGGAGTTATAGCAGAAGCAGAAGTTACAGCAGGAGCTTGAGCCCAAGTCCTGAGTACTCTGGGTGA 789 0.4601 MVWESNSLPFLQHRFRCFAICEAVVRICAFVSSKLWCVFIIFSSVVVGEIALNMRGRSYSYSPSPPRHYSRRRRSPSPRGRYRGRDRDLPTSLLVRNLHRDCRAEDLHGPFGQFGPVKDVYLPRDYYTGDPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPSEMRARERRRDRSYDYRRSPRTYSPSPDYSPPPRRRRHYRSISPRVRKYSDGSYSRSPYGSRSRSRSRSYSRSRSYSRSLSPSPEYSG* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02267 262 MobiDBLite consensus disorder prediction 171 262 - -
Phac7g02267 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 169 IPR000504 GO:0003723
Phac7g02267 262 Gene3D - 85 198 IPR012677 -
Phac7g02267 262 SUPERFAMILY RNA-binding domain, RBD 91 195 IPR035979 GO:0003676
Phac7g02267 262 MobiDBLite consensus disorder prediction 60 86 - -
Phac7g02267 262 SMART rrm1_1 92 165 IPR000504 GO:0003723
Phac7g02267 262 MobiDBLite consensus disorder prediction 222 262 - -
Phac7g02267 262 MobiDBLite consensus disorder prediction 171 192 - -
Phac7g02267 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 162 IPR000504 GO:0003723
Phac7g02267 262 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 90 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02267 Phac-Chr7 26298120 26301734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02267 91 255 Eukaryotic Initiation Factors Gene Family AT4G34110 23.494 4.34e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02267 K12900 - gmx:100816913 216.853