Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02222 ATGGGGTGTCTCTTGCTGCTTCTATGTTTTTCTAGCTTTTTATATGCTGCTTCTGCCTTAAACTCTGATGGGTTGGCTTTGTTGTCTCTCTCCCGGGACTGGACTGTTGAGTCTGGTGACATAAACTCCACATGGAAGTTGTCTGATTCCACTCCATGCTCGTGGGCAGGAGTGCATTGTGATCATGCCAATAATGTGAATTCTCTAAACCTCACTAGATATTCTATTTTTGGCCAATTAGGACCTGATATTGGACGTTTGATCCACTTGCAATCCATAGACTTATCATATAATAACATGTTTGAAAAAATTCCCCCAGAATTAAACAACTGCAGCATGCTTGAGTACATAGACATTTCTTCAAACAACTTTAGTGGAGGAATACCAGAGAGCTTTAGAAACTTGCAAGATTTGAAGTATGTGGATCTCTCAATTAATCTGCTGAGTGGTGGAATTCCTAAATCCTTGTTGGAAATTCCTCTCCTTGAAGAAGTGTATCTTAGTAACAACAGTTTAAGTGGTTCCATTCCCTCAAGTATTGGGAATATCACTAACCTTGTTACACTGGATCTTGCTTTTAATCAGCTGTCAGGGACTATTCCCATGTCCATTGGAAATTGTAGTAAATTAGAGAATCTGTATCTGGAAGGTAATGAATTGCGGGGAGTTATTCCGGAGAGTATAAATAATCTTGAAAATCTTCTTGAGTTATATCTGGATAGTAATAGTATTGGAGGTACTATTCAACTGGGATCTGGAAATTGCAAAAAGTTATCTATTCTGAGTCTTTCTTTCAATAACTTTAGTGGGGGTATACCATCAAGCTTGGGGAATTGTAGTGGCCTAACACTGTTTTTTGCTGTAGGCAGTAACTTAGTTGGCAGTATACCGTCAACCTTAGGCCTCCTGCACAGTCTTTCTATTCTATTCATTACACAGAACCAATTGGATGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGGAAGAGCTGCATTTGAATTCCAATGAACTCGAAGGAGAAATTCCTAGTGAATTAGGAAACTTGAGTAAATTACGAGATCTTAGATTGTATGAAAACCTTTTGACGGGAAAAATTCCACTTGGAATATGGAAAATTCAAACACTTGAGCAGGTCCACATATACAGTAATAACCTTTCAGGAGAGCTACCTCTTGAGATGGCAGAGCTTAAACATCTTAAGAATATCTCCATGTTTAATAATCAGTTCTCTGGAGTCATTCCTGAAAGCTTAGGAATCAACAGCAGTTTGGTTGTGTTAGATGTCACGTACAATAATTTCACCGGTGCCCTCCCACCAAATCTTTGCTTTGGAAAGCAATTGGTCAGGCTGAATACGGGTGGCAATCAATTTTATGGCAGCATACCTCCTGATATTGGAAGGTGCACAACTCTTACAAGGCTGAGACTTGAAGAAAACAATTTCACTGGGCCACTTCCTGATTTTGAAACTAATCCAAATCTCTTTCACTTGAGCATCAACAACAACAATATCAGTGGAGCAATTCCATCAAGTTTTGGAAACTGCACAAATCTCTCTCTTTTAGATTTATCCATGAACAGCTTGACAGGTCTTGTACCCTCAGAGCTAGGAAACCTTGTAAATCTCCGGAATTTGGTTCTTTCTCACAATACTTTGAAAGGTCCTTTGCCGCATCAACTGTCAAACTGTAACAAAATGATCAAGTTTGATGTTCGATACAATTTATTGAATGGTTCGTTTCCATCAATTTTTCGGAACTGGACTGAATTAACAACTTTAATGCTCTCAGAGAATAATTTTGATGGTGGTATTCCAGCTTTCTTGTCAGACTTTAAAAGGCTCAATGATTTACAACTTGGAGGAAACAAGTTTGGAGGAAACATTCCTAAATCGATTGGAGAACTGGTGGATTTGATGTATGATCTAAATCTAAGTGCTAATGGGCTGATAGGTGAGCTTCCGAGGGAGATTGAGAACCTGAAGAATCTGGTAAAACTGGACCTATCTTGGAACAATTTGACAGGAAGTATACAAGTTCTCGATGAGCTCAGTTCATTATCTGAGTTCAACATTTCATATAATTCTTTTGAAGGTCCTGTGCCACTACAGCTAACAAATTTGCCAAATTCTTCTTTATCGTTTTTGGGCAATCCTGGCTTATGTATCTCAATTTTCACTGAAAGAAGCTATTTAAGGCCATGTGATACAAATTCAAAAAAGTCAAAAAAGCTCAGTGAAGTTGCAATTGCGATGACAGCACTTGGATCCTCAATATCAGTTGTTCTGCTGCTGGGGTTAATTTATATATTCTTTATCAGAAAAATTAAGCAGGAAGCCACAATCAATGAGAAAGATAGTTCTCCATCCCTTCTCAATATGGTTATGGAAGCAACAGAAAATCTAAATGATCAGTATATTATTGGCAGAGGAGCTCAAGGAGTTGTTTATAAAGCAGCACTTGGTCCAGACAAAATTTTGGCGATAAAGAAGTTTGTATTTGCCAGTGATGAAGCGAAAAGCTCAAGCATGACCAGAGAAATTCAAACCCTTGGAACGATTAGGCATCGAAATTTGGCCAAATTGGAAGGCTGCTGGTTGAGAGAAAACTATGGTCTAATTGCATACAAATACATGCCAAATGGAAGTCTGCATGATGCTTTGCATGAGAAGAATCGATCACACTCCTTAGAGTGGAATATCCGGAATAAGATAGCTATTGGAATTGCTCATGGATTGGCTTATCTCCATCATGACTGTGATCCTGTCATAGTGCACAGAGATATCAAAACAACCAATATACTTCTAGATTCTGAGATGGAGCCTCATATTGCAGATTTTGGTATTGCCAAGCTTTTGGATCAGCCTTCTACCTCCACACAGTCAATATATGTCAGTGGTACACTTGGTTATATAGCACCAGAGAATGCTTATACAACAACAAAGGGTAAAGAGTCCGATGTATACAGTTATGGGGTAGTATTGCTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCATCATTTATGGAGGGAACAGATATAGTTAATTGGGCTAGATCTGCCTGGGAGGAAGCAGGAGTTGTTGATGAAATTGTTGATTCAGAGTTAGCTGATGAAATTTCAAATTCTGATGTGATGAAACAAGTTACAGAGGTGCTTTTGGTGGCTTTGAGATGTACCCTAAAGGATCCACGCAGCAGACCTACGATGAGGGATGTTATCAAGCATTTGAATACTGATGCTAAAAACTCCACATAA 3267 0.3878 MGCLLLLLCFSSFLYAASALNSDGLALLSLSRDWTVESGDINSTWKLSDSTPCSWAGVHCDHANNVNSLNLTRYSIFGQLGPDIGRLIHLQSIDLSYNNMFEKIPPELNNCSMLEYIDISSNNFSGGIPESFRNLQDLKYVDLSINLLSGGIPKSLLEIPLLEEVYLSNNSLSGSIPSSIGNITNLVTLDLAFNQLSGTIPMSIGNCSKLENLYLEGNELRGVIPESINNLENLLELYLDSNSIGGTIQLGSGNCKKLSILSLSFNNFSGGIPSSLGNCSGLTLFFAVGSNLVGSIPSTLGLLHSLSILFITQNQLDGKIPPQIGNCKSLEELHLNSNELEGEIPSELGNLSKLRDLRLYENLLTGKIPLGIWKIQTLEQVHIYSNNLSGELPLEMAELKHLKNISMFNNQFSGVIPESLGINSSLVVLDVTYNNFTGALPPNLCFGKQLVRLNTGGNQFYGSIPPDIGRCTTLTRLRLEENNFTGPLPDFETNPNLFHLSINNNNISGAIPSSFGNCTNLSLLDLSMNSLTGLVPSELGNLVNLRNLVLSHNTLKGPLPHQLSNCNKMIKFDVRYNLLNGSFPSIFRNWTELTTLMLSENNFDGGIPAFLSDFKRLNDLQLGGNKFGGNIPKSIGELVDLMYDLNLSANGLIGELPREIENLKNLVKLDLSWNNLTGSIQVLDELSSLSEFNISYNSFEGPVPLQLTNLPNSSLSFLGNPGLCISIFTERSYLRPCDTNSKKSKKLSEVAIAMTALGSSISVVLLLGLIYIFFIRKIKQEATINEKDSSPSLLNMVMEATENLNDQYIIGRGAQGVVYKAALGPDKILAIKKFVFASDEAKSSSMTREIQTLGTIRHRNLAKLEGCWLRENYGLIAYKYMPNGSLHDALHEKNRSHSLEWNIRNKIAIGIAHGLAYLHHDCDPVIVHRDIKTTNILLDSEMEPHIADFGIAKLLDQPSTSTQSIYVSGTLGYIAPENAYTTTKGKESDVYSYGVVLLELISRKKALDPSFMEGTDIVNWARSAWEEAGVVDEIVDSELADEISNSDVMKQVTEVLLVALRCTLKDPRSRPTMRDVIKHLNTDAKNST* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02222 1088 SMART LRR_typ_2 303 327 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 518 541 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 542 566 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 183 207 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 328 351 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 663 690 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 87 111 IPR003591 -
Phac7g02222 1088 SMART LRR_typ_2 231 255 IPR003591 -
Phac7g02222 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Phac7g02222 1088 ProSiteProfiles Leucine-rich repeat profile. 665 687 IPR001611 GO:0005515
Phac7g02222 1088 Gene3D Phosphorylase Kinase; domain 1 774 880 - -
Phac7g02222 1088 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 347 1081 - -
Phac7g02222 1088 FunFam Serine/threonine-protein kinase-like protein CCR4 881 1088 - -
Phac7g02222 1088 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 412 735 - -
Phac7g02222 1088 Gene3D Ribonuclease Inhibitor 20 301 IPR032675 -
Phac7g02222 1088 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 321 411 - -
Phac7g02222 1088 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Phac7g02222 1088 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Phac7g02222 1088 Pfam Leucine rich repeat 495 555 IPR001611 GO:0005515
Phac7g02222 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 179 308 - -
Phac7g02222 1088 Gene3D Transferase(Phosphotransferase) domain 1 881 1088 - -
Phac7g02222 1088 SUPERFAMILY L domain-like 444 731 - -
Phac7g02222 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 178 - -
Phac7g02222 1088 SMART LRR_sd22_2 207 233 - -
Phac7g02222 1088 SMART LRR_sd22_2 663 688 - -
Phac7g02222 1088 SMART LRR_sd22_2 183 198 - -
Phac7g02222 1088 SMART LRR_sd22_2 542 568 - -
Phac7g02222 1088 SMART LRR_sd22_2 303 335 - -
Phac7g02222 1088 SUPERFAMILY Protein kinase-like (PK-like) 792 1080 IPR011009 -
Phac7g02222 1088 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 772 880 - -
Phac7g02222 1088 SMART serkin_6 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02222 1088 SUPERFAMILY L domain-like 64 201 - -
Phac7g02222 1088 ProSiteProfiles Protein kinase domain profile. 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02222 1088 Gene3D Ribonuclease Inhibitor 302 451 IPR032675 -
Phac7g02222 1088 Pfam Protein kinase domain 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02222 1088 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Phac7g02222 1088 SUPERFAMILY RNI-like 165 508 - -
Phac7g02222 1088 Gene3D Ribonuclease Inhibitor 452 746 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02222 Phac-Chr7 25796277 25800461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02222 11 1080 Receptor kinase-like Gene Family AT1G73080 50.550 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac7g02222 Pkinase 6.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02222 - - gmx:100817655 1720.67