Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02191 ATGGAAGCACCAGAGGAACTCTCTGTGGGGGGGTCCAAAGATCACACCAACATTGTCAAGGGGAAAAGAACCAAAAGGGTGAGGCCACAATCCCCTATCCCCTTCTCCGTCACTGCCAATTCCTCCACCGGAGAAGGAGAAGGAGAAGGACAAGATTGCTGCAATGTTGATGACAACACCAACACCACCACCAACAAAAATTATGATATTAATAACAACAACAACAGCTCTCCCACCACTTCTTCTGCAGGATTACAAGACAGCACAGATGAAGAGGAGGCCATGGCCAATTGCCTCATCCTCCTAGCACAAGGACAATCCCGGGAATCTCATAAACATGCCGAGGAAGATTTGGGCATGAACTACGCCAAGTACAGCAGTAGGAAATTCTTGGAAGCGGCTACCTTGGGGTCTAGCAGGGCAGGGTACTATGTTTATGAATGCAAGACATGTAACAGAACTTTCCCTTCTTTTCAAGCACTTGGAGGCCACAGGGCCAGTCACAAGAAGCCTAAGGCAATGATTGCCATTGGCCAAGAGAAGAAGCAGCAACACCTTTTGTCATCAGATGAGGAAGAGTTTCAATTGAAGACCAATAATAAATCACCATTTTCCCTTCAACTGAATACAAAGGCCAATTTGTACAACAAATCCAAGGTGCATGAGTGTTCCATCTGTGGTGCTGAATTCACATCGGGGCAGGCATTGGGAGGCCACATGAGACGCCACCGTGCACCGGTTGGGATCCCCACCACACTCTCCTTCACCCCATTGGCTTTGGAACCAGAAGAAGATCACCCCAGAAAGAAAAGGAATATGTTGAACTTGGAATTGGATCTCAATCTTCCTGCCCCCGAAGATGATCAAAGAGAATCCAAGTTTTCCTTCCAATCCAAGCAACAACAACAACATGGACAGAAACAACAACATGGACAAAAACAACAGCAGCAGCAACAGCAACAACCACAAACAAGTCTTGTCTTAACTGCCCCAGCTTTGGTTGATTGTCATTACTGA 1017 0.4671 MEAPEELSVGGSKDHTNIVKGKRTKRVRPQSPIPFSVTANSSTGEGEGEGQDCCNVDDNTNTTTNKNYDINNNNNSSPTTSSAGLQDSTDEEEAMANCLILLAQGQSRESHKHAEEDLGMNYAKYSSRKFLEAATLGSSRAGYYVYECKTCNRTFPSFQALGGHRASHKKPKAMIAIGQEKKQQHLLSSDEEEFQLKTNNKSPFSLQLNTKANLYNKSKVHECSICGAEFTSGQALGGHMRRHRAPVGIPTTLSFTPLALEPEEDHPRKKRNMLNLELDLNLPAPEDDQRESKFSFQSKQQQQHGQKQQHGQKQQQQQQQQPQTSLVLTAPALVDCHY* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02191 338 ProSitePatterns Zinc finger C2H2 type domain signature. 148 168 IPR013087 -
Phac7g02191 338 MobiDBLite consensus disorder prediction 295 324 - -
Phac7g02191 338 MobiDBLite consensus disorder prediction 31 88 - -
Phac7g02191 338 Pfam C2H2-type zinc finger 145 171 - -
Phac7g02191 338 Pfam C2H2-type zinc finger 220 246 - -
Phac7g02191 338 ProSitePatterns Zinc finger C2H2 type domain signature. 223 243 IPR013087 -
Phac7g02191 338 MobiDBLite consensus disorder prediction 284 324 - -
Phac7g02191 338 SUPERFAMILY beta-beta-alpha zinc fingers 145 243 IPR036236 -
Phac7g02191 338 Gene3D Classic Zinc Finger 124 202 - -
Phac7g02191 338 Gene3D Classic Zinc Finger 203 251 - -
Phac7g02191 338 PANTHER ZINC FINGER PROTEIN ZAT5 77 306 - -
Phac7g02191 338 MobiDBLite consensus disorder prediction 1 90 - -
Phac7g02191 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 146 173 IPR013087 -
Phac7g02191 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 221 243 IPR013087 -
Phac7g02191 338 SMART c2h2final6 221 243 IPR013087 -
Phac7g02191 338 SMART c2h2final6 146 168 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02191 Phac-Chr7 25499420 25501814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02191 1 338 C2H2 Transcription Factor Family AT5G04390 44.094 4.47e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02191 zf-C2H2_6 6.7e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02191 - - gmx:100799383 488.804