Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02186 ATGGGTCGCGAAACTGTGTTCCTTCCAGCCCCACCAACCACTGCCACCACTGCAGTGAATCCAGTGGCAGCACCAGCTACACCACCTACTTCTCTTGCTCCTGGTTTCAGGTTCCACCCAACTGACGAGGAGCTTGTAATCTATTACCTGAAGCGCAAGGTTTCTGGCAAAAGCTTCCGATTTGATGCTATATCTGAAGTGGATATATACAGGAGCGAGCCCTGGGACCTAGCAGATAAGTCGAGGTTGAAGACCAGGGACCAGGAGTGGTATTTTTTTAGTGCATTGGACAAGAAATATGGAAATGGTGGGAGGATGAACAGGGCTACCAACAAAGGGTATTGGAAAGCCACTGGGAATGATCGACCAGTGAAACATGATCAAAGGACTGTGGGATTGAAGAAAACTTTGGTGTTTCACAGTGGCCGAGCTCCTGTTGGAAAGAGGACTAATTGGGTTATGCATGAGTACAGACTTGTTGACGAGGAGCTAGAGAGGGCTGGGACTGGATCCTCTCAGCCTCAGGATGCCTATGTCTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGACAACGATATGCACCCTTTGTTGAAGAAGAGTGGAATGATGAGTCGGGAATGATTCCAGGGGCAGAGCCTGTGTATAATGGCTCTGTTGCCTACCAACCACTTGTTGAAGGCAATGGTGTTGTATGCACTGAAGGGAGAAATGGTGTTGTACAGGACACTCAATCCCACAATAAAGCTCCGTTTGATGTGAACAAGCTTCCTATAGAGACTCAAAATCTTCTAGCTGTGTGCAAGAGGGAAAGCATGGCTGAGTATCCATCTCCTGAAAAGGATGATAATAATTGTAAGCAAGTGGATGAGTACCCTTCACCTCAAACGGACAATCCAAAGCCTTTCTCTCAAATATACAAACGAAGGCGGCATAACTTGACCTCCAACCACTCTAATGTTACTGGAGATACAATCCGAGCCAGCCAGGACCCATGCTCCTCTACAATAACAACTGCAGCAACAACGCTCCCAACCACCACTGCTGGTGTCGCCACCACCAACACTGCACCGAAAAAACATTTTCTGTCTGCACTGGTGGAGTTTTCCCTGCAAGAGTCCCTTGAATCTAAGGAAAGCCTTGCTTTGGTTAAGGCACCGGATTTTGACGCCGAAAACCTTGAGTCATCCATGCCTCCAAGCTCTGCCAAGTTCATCAAGAACTTGCAGAGTGAGCTTCATAAGCTTGGAGTCGAAAAGGAGACAATGAGGTTTGAGATGATGAGCGCTCAAGCGATGATTAACATTCTCCAGTCTCGACTTGACATTGTCTGCAAAGAAAATGAGGATTTGAAGAGGAGTGCCCAAAAACCTTAG 1386 0.469 MGRETVFLPAPPTTATTAVNPVAAPATPPTSLAPGFRFHPTDEELVIYYLKRKVSGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATNKGYWKATGNDRPVKHDQRTVGLKKTLVFHSGRAPVGKRTNWVMHEYRLVDEELERAGTGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWNDESGMIPGAEPVYNGSVAYQPLVEGNGVVCTEGRNGVVQDTQSHNKAPFDVNKLPIETQNLLAVCKRESMAEYPSPEKDDNNCKQVDEYPSPQTDNPKPFSQIYKRRRHNLTSNHSNVTGDTIRASQDPCSSTITTAATTLPTTTAGVATTNTAPKKHFLSALVEFSLQESLESKESLALVKAPDFDAENLESSMPPSSAKFIKNLQSELHKLGVEKETMRFEMMSAQAMINILQSRLDIVCKENEDLKRSAQKP* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02186 461 MobiDBLite consensus disorder prediction 277 306 - -
Phac7g02186 461 ProSiteProfiles NAC domain profile. 32 186 IPR003441 GO:0003677|GO:0006355
Phac7g02186 461 Pfam No apical meristem (NAM) protein 34 159 IPR003441 GO:0003677|GO:0006355
Phac7g02186 461 MobiDBLite consensus disorder prediction 292 306 - -
Phac7g02186 461 Gene3D NAC domain 41 189 IPR036093 GO:0003677|GO:0006355
Phac7g02186 461 FunFam Nac domain-containing protein 86 41 189 - -
Phac7g02186 461 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 31 316 - -
Phac7g02186 461 SUPERFAMILY NAC domain 26 187 IPR036093 GO:0003677|GO:0006355
Phac7g02186 461 MobiDBLite consensus disorder prediction 277 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02186 Phac-Chr7 25371847 25383768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02186 1 456 NAC Transcription Factor Family AT3G10480 43.038 5.96e-115 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac7g02186 NAM 4.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02186 - - gmx:100808783 752.666