Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02185 ATGGCACCAATAGGTCCCGGCTTCCGATTCCACCCCACTGACGAAGAGCTGGTTGTGTTCTACCTGAAGCGCAAGATCACCGGAAACCTCTCCCGGTATGACCACATCGCCGTGGTTGATGTCTACAAGCTCGAGCCTTGGGACCTTCCCCCTATGTCGAAGCTGAAGACCAAGGACTTGGAATGGTACTTCTTCAGCGTGCTGGACCGCAAGTACGGTAATGGCTCCAGGACCAACCGCGCCACCGAGAAGGGCTACTGGAAGACCACCGGAAAGGACCGCCCCGTGGCCCACGGCGACCGCATCGTCGGGATGAAGAAGACCCTCGTTTACCACATCGGTCGGGCCCCACACGGCCGTCGCACGAACTGGGTCATGCACGAGTACAAGATGCTCGATGAAGAATTGACGCGTGCTGGCACAGTGCTGGACGTGTATGTGGTATGTAGGATTTTCGAGAAGAGTGGTTCTGGACCGAAGAATGGGGCCAAGTATGGTGCTCCCTTGGACGAGAAGGAGTGGGATGCGGAGGAGGAGAATGAGGAGAAGAAGGTGGTTCCCTTGCCGGAGACTGCTCCTTTGCCGGTGACAGCTGCTGTGGCTCCTCCCTTGGTTGCTGATGATGAAGTTTGGAATATTGGGGCCTTTTTGGAAACTAACGATCTTGACATGGAGCTTGATTTGACTGATATGATTGGGAGTGTTACTTTTCCATCTTCGAACTTCCATCACGGGGAGTGTAGTACCCACGTTGAGAATTCCCAAGAACTCATCAAGGATCAGAAGCCATTAGAAGGCACCTTTGGAATTTCTGGGCCGGAAAATGGCCAGCCTCTTGATATGGCTGAGCAACATGGCACGGGCACAAGTTCTGTGAGAGATGGAGACGATGGTGAGCTGAGCGAGATTGAGAATCTTCTCAATTTCAATTATGCATCGGATAATATGGATCTGGATCTATATTTTGATGCCACCCAGGATCTTCCAGCGGCTGATGATGGATCATTCTTGGAAACCAATGATCTTGCAATTGGGAATGAGGGTAATCCCACTGAGTCTGATCCTTCTGCAAACGATATGCTAGACGAGTATCTTGCACTCCCTGATGATGATATTTGCAACTACATATCTTTTGATCTTCCTCAGATTCCAGAGAGTGAAAACTCTGATTCCAACCAAGGATTACCTTTAACCCAGCAGACTCTGGAGGGAGAAACCGCTGATAAAGCTGTGGTTAGTAAACATGATTCTGATGCAAAACCCAGCAAGGAGGCTTTCTCTGTGCAGAATACAGGGGAGGAAAAGTTAGCACCAGAAAATACAAACCCATTCGTTAAACAGGCCTATGGATGGTTAGCTAACATACCTGCTGCACCTGCACATGCTTTTGAGTTTCCAGCTAAGGATATTACGCTTGGGATTCATCGTGCAGCTCAGTCTTCCCATACAGCTCATATAACTACAGGTATGATCAGCATAACAGACATTACTTTCAGAGGCAATGCGATGAATTGGCCCATGGGAAAAAGCGGAGGGTTTAACACTGCAATATCTACTGAGTTTTCTCAACCGGATGTTAATTGTGCTGCTTTGATACCTCTTTCTGGCAAGACCGCATTTGTGTTGTCACATGGCTGGATTTTCTTGACGGGTTTCTCAGTTCTTATTCTTTCACTTAGTTTCAAGATTGGAAGCATGATGTATACTGGTAAGTGA 1716 0.486 MAPIGPGFRFHPTDEELVVFYLKRKITGNLSRYDHIAVVDVYKLEPWDLPPMSKLKTKDLEWYFFSVLDRKYGNGSRTNRATEKGYWKTTGKDRPVAHGDRIVGMKKTLVYHIGRAPHGRRTNWVMHEYKMLDEELTRAGTVLDVYVVCRIFEKSGSGPKNGAKYGAPLDEKEWDAEEENEEKKVVPLPETAPLPVTAAVAPPLVADDEVWNIGAFLETNDLDMELDLTDMIGSVTFPSSNFHHGECSTHVENSQELIKDQKPLEGTFGISGPENGQPLDMAEQHGTGTSSVRDGDDGELSEIENLLNFNYASDNMDLDLYFDATQDLPAADDGSFLETNDLAIGNEGNPTESDPSANDMLDEYLALPDDDICNYISFDLPQIPESENSDSNQGLPLTQQTLEGETADKAVVSKHDSDAKPSKEAFSVQNTGEEKLAPENTNPFVKQAYGWLANIPAAPAHAFEFPAKDITLGIHRAAQSSHTAHITTGMISITDITFRGNAMNWPMGKSGGFNTAISTEFSQPDVNCAALIPLSGKTAFVLSHGWIFLTGFSVLILSLSFKIGSMMYTGK* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02185 571 Gene3D NAC domain 13 157 IPR036093 GO:0003677|GO:0006355
Phac7g02185 571 SUPERFAMILY NAC domain 4 154 IPR036093 GO:0003677|GO:0006355
Phac7g02185 571 FunFam Nac domain-containing protein 86 13 157 - -
Phac7g02185 571 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 239 - -
Phac7g02185 571 MobiDBLite consensus disorder prediction 423 437 - -
Phac7g02185 571 MobiDBLite consensus disorder prediction 342 356 - -
Phac7g02185 571 MobiDBLite consensus disorder prediction 340 359 - -
Phac7g02185 571 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Phac7g02185 571 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Phac7g02185 571 MobiDBLite consensus disorder prediction 413 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02185 Phac-Chr7 25332910 25336714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02185 4 567 NAC Transcription Factor Family AT5G04410 36.532 2.44e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac7g02185 NAM 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02185 - - vun:114191703 919.457