Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02182 ATGTCAGGAGAGGAAATCTTGTCATCCAACGAAGAAGAATATGATATATCTCAGCCTCCATTTGGTAACAGAAATGGCTACAATTCAAGAATAGGAATCTATCACTCTCTAGTTAAGCTTGACACTAAGCATGAAATCCCAACAAAGCCTGACCTTAACACTGCCCATTTTGTGCTGTCACAATTCCCACAAGCACATCTTGCTGAGGCAAAAACTGCATTCATTGATGCAAAAACTAATCTGAGTGTTAGCTATGGTGAGCTAAGAAGGTCTACCTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGGGGTTAGGAAAGGTGATGTGGTATTTTTATTGTCACCAAACTCAACCTTGTACTCAGCCATATGCCTAGCTGTGTTATCAGTTGGAGCAATTCTGACCCCTGCCAACCCCATCAACACTGCATCAGAAATTGCGAAACAAGTGAGTGACTCAGGTGCTAAACTAGCCATCTCAGCTCCAGAGGAGCTACACAAATTGGTCCGAACTGGGGTTCCTACAATTCTCACTTCTCGTTCTTCTGATGGCAACATGTTATCAGTTGAAGAGTTAATAGAAGGCTGTTATAATTCAACAGAGTTGCCGCAAGTTCCTGTGGCACAGTCAGATACTGCTGCTATACTTTACTCTTCAGGGACCACAGGAATAAGCAAAGGTGTGGTCTTAACTCATGCAAATCTCATTTCCATAACGAGATTAGTTTTGTGGTCTGCTGAGGTCAGTGAATCCCAAGATGATATTTTCTTGGTCTTCATTCCAATGTTTCACATCTATGGACTTGTATTCTTTGGATTAGGATTGTTATGTGTGGGTATAACAACAGTTTTGATGCGGAAGTTTGATTTCCAAGATATGCTTGATGCAATCCAGAAGCACAAGGTTAACAACATACCAGCTGTGCCACCAGTGATCCTTGCGCTAGTAAAGCATTCGAGGAAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGGGTGGGGACAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACAGAAGTTCAGGAAGATGTTTCCATGGATTGAACTAAGGCAGGGTTATGGACTAACAGAAAGTAGTGGTGGAGCAACATTTTTTGCCTCAGATAAAGATGCTAAAGCTCATCCAGATTCGTGTGGGAAGCTGATTCCAACATTTTTTGCAAAAGTTATAGACACTGAAACGGGGAAGCCTTTGCCGCCTCACAAAGAAGGAGAGTTGTGGTTAAAAAGTCCTACTATTATGAAAGGATATCTTGGAAATTTGGAGGCAACAAGTGCAACAATTGATTCAGAAGGTTGGTTGAGGACTGGTGATCTTGGTTACATTGATGATAATGGATTTGTTTACATAGTTGAACGGATAAAAGAGCTAATCAAGCACAATGGGTATCAGGTAGCTCCTGCAGAACTGGAGTCTGTGCTGCTGAGTCACCCTCTTATAGCTGATGCAGCAGTTATACCGTGTGTTACCCTCTCACGTTTTTCATTCTTACTATTCATAATCTGTGTGAATTTCTCATTTGGAAACAAAGACATGATGCAGGTTGGAAGATGA 1578 0.4221 MSGEEILSSNEEEYDISQPPFGNRNGYNSRIGIYHSLVKLDTKHEIPTKPDLNTAHFVLSQFPQAHLAEAKTAFIDAKTNLSVSYGELRRSTYSLASALFHGLGVRKGDVVFLLSPNSTLYSAICLAVLSVGAILTPANPINTASEIAKQVSDSGAKLAISAPEELHKLVRTGVPTILTSRSSDGNMLSVEELIEGCYNSTELPQVPVAQSDTAAILYSSGTTGISKGVVLTHANLISITRLVLWSAEVSESQDDIFLVFIPMFHIYGLVFFGLGLLCVGITTVLMRKFDFQDMLDAIQKHKVNNIPAVPPVILALVKHSRKARCDLSSLRRVGTGAAPLSKEVAQKFRKMFPWIELRQGYGLTESSGGATFFASDKDAKAHPDSCGKLIPTFFAKVIDTETGKPLPPHKEGELWLKSPTIMKGYLGNLEATSATIDSEGWLRTGDLGYIDDNGFVYIVERIKELIKHNGYQVAPAELESVLLSHPLIADAAVIPCVTLSRFSFLLFIICVNFSFGNKDMMQVGR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02182 525 Gene3D - 41 463 IPR042099 -
Phac7g02182 525 MobiDBLite consensus disorder prediction 1 21 - -
Phac7g02182 525 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 44 495 - -
Phac7g02182 525 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 463 - -
Phac7g02182 525 Gene3D - 464 501 IPR045851 -
Phac7g02182 525 Pfam AMP-binding enzyme 69 467 IPR000873 -
Phac7g02182 525 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Phac7g02182 525 SUPERFAMILY Acetyl-CoA synthetase-like 52 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02182 Phac-Chr7 25278879 25281362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02182 59 495 Monolignol Biosynthesis Gene Families AT1G20500 42.506 1.14e-121 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02182 K10526 - gmx:100783104 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02182 7 25278879 25281362 Phac7g02182 7 25278879 25281362 ECH