Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02145 ATGAAGTTCTGCAAGACCTACCAGCGATACATGCAAGGGCATGACCACAAGCTCCCTGCTGTTGGCTTCAAGAAGCTCAAAAAGATCATGAAAAGGTGCAGGAGAGCCTCCACAACCACCTGCCCTGATCATTGCCCAGTGTGCGATGGGACCTTTTTCCCTTCCCTTCTCAATGAGATGTCAGACATAGTAGGATGCTTTAACCAGCGAGCGCAGAAATTGCTGGAAGTGCATCTTGCTTCTGGCTTCAGAAAGTACTTTCTCATGTTGAAAGGAAAAGGGATTAGGAATCATATTGGTCTAATCGAAGAAGGAAAAGATCTAGTCATATATGCACTCATAAATGCCATTGCAATTCGAAAAATATTAAAGAAATATGACAAGATTCATTATTCCAAGCAAGGCCAATTATTCAAGTCAAAAGTCCAGACCATGCACAAGGAAATTCTTCAGAGTCCTTGGCTTTCTGAGCTTATTGCCTTACACATTAACTTGAGGGAAACAAAAGCCAAGCCAAGGGAGGCATCTGCACTGTTTCATGGATGTTATCTAAGATTCAAGGATGGAAAACCATCACTTACTTGTGAGCTCTTTGATTCCTTCAAAATGGACATTAACCTAACATGCTCCATATGCTTGGATACAGTGTTTGATCCGGTTTCTCTGACGTGTGGTCACATATTCTGCTACTCCTGCGCTTGCTCAGCTGCATCAGTTACCATTGTTGATGGACTTAAGGCAGCAAAGTCCAAAGCAAAATGTGCTCTATGCCGACAGCAAGGAATTTACGAAGATGCTGTGCACTTGGAAGAATTGAATATTCTGCTAGGTCGAAGGTGCAAAGACTATTGGGAGGAAAGGCTTCAGATGGAAAGAACAGAGAGGGTTAAGCAAGTGAAGGAGCACTGGGAAACACAGTGTAGGGTGTTCGTAGGCATCTAA 942 0.4321 MKFCKTYQRYMQGHDHKLPAVGFKKLKKIMKRCRRASTTTCPDHCPVCDGTFFPSLLNEMSDIVGCFNQRAQKLLEVHLASGFRKYFLMLKGKGIRNHIGLIEEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSKVQTMHKEILQSPWLSELIALHINLRETKAKPREASALFHGCYLRFKDGKPSLTCELFDSFKMDINLTCSICLDTVFDPVSLTCGHIFCYSCACSAASVTIVDGLKAAKSKAKCALCRQQGIYEDAVHLEELNILLGRRCKDYWEERLQMERTERVKQVKEHWETQCRVFVGI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02145 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 312 IPR033326 -
Phac7g02145 313 ProSiteProfiles Zinc finger RING-type profile. 209 258 IPR001841 -
Phac7g02145 313 SMART ring_2 209 257 IPR001841 -
Phac7g02145 313 ProSitePatterns Zinc finger RING-type signature. 224 233 IPR017907 -
Phac7g02145 313 ProSiteProfiles SPX domain profile. 1 140 IPR004331 -
Phac7g02145 313 Pfam Zinc finger, C3HC4 type (RING finger) 207 260 - -
Phac7g02145 313 SUPERFAMILY RING/U-box 201 260 - -
Phac7g02145 313 CDD SPX_BAH1-like 2 136 - -
Phac7g02145 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 311 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02145 Phac-Chr7 24536151 24543595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02145 206 258 C3H Transcription Factor Family AT4G28270 37.931 2.35e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02145 K16275 - gmx:100803060 553.903