Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02144 ATGAAGTTCTGCAAGACCTACCAGCGATACATGCAAGGGCATGACCACAAGCTCCCTGCTGTTGGCTTCAAGAAGCTCAAAAAGATCATGAAAAGGTGCAGGAGAGCCTCCACAACCACCTGCCCTGATCATTGCCCAGTGTGCGATGGGACCTTTTTCCCTTCCCTTCTCAATGAGATGTCAGACATAGTAGGATGCTTTAACCAGCGAGCGCAGAAATTGCTGGAAGTGCATCTTGCTTCTGGCTTCAGAAAGTACTTTCTCATGTTGAAAGGAAAAGGGATTAGGAATCATATTGGTCTAATCGAAGAAGGAAAAGATCTAGTCATATATGCACTCATAAATGCCATTGCAATTCGAAAAATATTAAAGAAATATGACAAGATTCATTATTCCAAGCAAGGCCAATTATTCAAGTCAAAAGTCCAGACCATGCACAAGGAAATTCTTCAGAGTCCTTGGCTTTCTGAGCTTATTGCCTTACACATTAACTTGAGGGAAACAAAAGCCAAGCCAAGGGAGGCATCTGCACTGTTTCATGGATGTTATCTAAGATTCAAGGATGGAAAACCATCACTTACTTGTGAGCTCTTTGATTCCTTCAAAATGGACATTAACCTAACATGCTCCATATGCTTGGATACAGTGTTTGATCCGGTTTCTCTGACGTGTGGTCACATATTCTGCTACTCCTGCGCTTGCTCAGCTGCATCAGTTACCATTGTTGATGGACTTAAGGCAGCAAAGTCCAAAGCAAAATGTGCTCTATGCCGACAGGTAAGCAACCGGATTGCAAGGAATTTACGAAGATGCTGTGCACTTGGAAGAATTGAATATTCTGCTAGGTCGAAGGTGCAAAGACTATTGGGAGGAAAGGCTTCAGATGGAAAGAACAGAGAGGGTTAA 906 0.4294 MKFCKTYQRYMQGHDHKLPAVGFKKLKKIMKRCRRASTTTCPDHCPVCDGTFFPSLLNEMSDIVGCFNQRAQKLLEVHLASGFRKYFLMLKGKGIRNHIGLIEEGKDLVIYALINAIAIRKILKKYDKIHYSKQGQLFKSKVQTMHKEILQSPWLSELIALHINLRETKAKPREASALFHGCYLRFKDGKPSLTCELFDSFKMDINLTCSICLDTVFDPVSLTCGHIFCYSCACSAASVTIVDGLKAAKSKAKCALCRQVSNRIARNLRRCCALGRIEYSARSKVQRLLGGKASDGKNREG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02144 301 Pfam Zinc finger, C3HC4 type (RING finger) 207 262 - -
Phac7g02144 301 SUPERFAMILY RING/U-box 201 261 - -
Phac7g02144 301 ProSiteProfiles Zinc finger RING-type profile. 209 258 IPR001841 -
Phac7g02144 301 SMART ring_2 209 257 IPR001841 -
Phac7g02144 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 295 IPR013083 -
Phac7g02144 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 260 IPR033326 -
Phac7g02144 301 ProSitePatterns Zinc finger RING-type signature. 224 233 IPR017907 -
Phac7g02144 301 ProSiteProfiles SPX domain profile. 1 140 IPR004331 -
Phac7g02144 301 CDD SPX_BAH1-like 2 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02144 Phac-Chr7 24536151 24543595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02144 206 258 C3H Transcription Factor Family AT4G28270 37.931 1.37e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02144 K16275 - gmx:100803060 457.988