Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02120 ATGGGTGATATTGAAGAGAACGATGCTCTTCCGAAGAACAAACCTTCCACTGAAAAGGATGTTTCTGACGAGCTTGAGTTGAGAATGAAGAAGTATCTCAGAGGAGAAAGTGCTAATTTGGAGGTTTTGAAGGATAAAAAGCTGAAGGGTCAACTAGCTGCTAAGGAACAGTTATATGGAAAATCCGCACAAGCTGCTGCTAAGGCCGAGAAGTGGCTTATGCCTAGTGAAGGAGGTTATCTGGAGGCCGAAGGCTTGGAAAAGACATGGAGGATCAAACAGGAGACAATAGCTCATGAAGTAGATATCTCAGGCTCACGGAAACAGTATGATATTATTTTACCAGAACTTGGTCCATACACTCTGGATTTTACTTCAAGTGGCCGGTATATGGCTGTGGGTGGTCGTAAGGGCCATCTAGGAATAGTGGACATGATAAATCTGAGCCTAATTAGAGAGCTTCAGGTAAGGGAAACAGTACGTGATGTGGTATTCTTGCACAATGAGCTCTTTTTTGCTGCTGCACAGAAAAGGTATCCATACATCTACAATCGAGAAGGCACCGAGCTTCACTGCCTTAAGGAACATGGTCCAGTGTTAAGGCTTCAGTTTCTGAAAAACCATTTTCTCTTGGCTACAATCAATAAGTTTGGGCAACTTCGCTATCAGGATGTTACAATGGGTTCAATGGTTGGTAATTTTCGAACTGGTGTAGGACGTACAAATGTGATGCAAGTAAACCCCTTCAATGGGGTTGTTTCTTTAGGTCACTCAGCTGGAACTGTTACCATGTGGAAGCCGACCAGTTCTGCTCCTCTTGTCAAGATGCTATGTCATCACGGGCCTGTCTCAGCGCTGGCATTCCACTCAAATGGCCACTTGATGGCCACTGCAGGGAAAGATAAAAAAGTTAAGCTTTGGGACTTAAGGAAATTTGAGGTTCTTCAAACCTTACCTGGTCATGCAAATACTCTGGATTTTAGTCAAAAGGGCTTACTTTCTTGCGGTAATGGTTCATTGATCCAGGTTCTGCGAGATGTTTCTGGTACACAGAATTATTCCAGGTACATGACTCATTCCATGGTTAAAGGTTACCAGGTAGAAAAATTAGTATTTCGACCATATGAAGATGTTTTAGGTATAGGGCATTCCATGGGTTGGTCTAGTATTCTTATTCCAGGAGCTGGAGAACCCAACTTTGACTCATGGGTTGCAAACCCGTTCGAAACTTCCAAACAGAGGAGAGAAAAGGAAATACGGACTCTACTTGATAAGCTCCCACCTGAGACTATCATGTTGGACCCCAGCAAGATTGGTACGGTGAAACCAAAAGGAGAGAGGCCAACAAAGAAAGAGAAGGAGGCTGAGATAGAAGCTGCCGTTGAAGCTACTAAGGGCATGAAACTGAAGAAGAAGACAAAAGGTAGAAACAAGCCAGGTAAAATGATACAGAAAAAGCAAGAGGCCATTGCTAGAGTGAAGAGGCCCTACATGGAGCAGAAAATTCAAGAAGAGGAAAACATGTCAAGAAAGAAGCAGAAAACTAGTGTTGAACTACCAAAATCTTTACAACGGTTTGCTCGTAAAAAGGCATCGTCGTGA 1602 0.432 MGDIEENDALPKNKPSTEKDVSDELELRMKKYLRGESANLEVLKDKKLKGQLAAKEQLYGKSAQAAAKAEKWLMPSEGGYLEAEGLEKTWRIKQETIAHEVDISGSRKQYDIILPELGPYTLDFTSSGRYMAVGGRKGHLGIVDMINLSLIRELQVRETVRDVVFLHNELFFAAAQKRYPYIYNREGTELHCLKEHGPVLRLQFLKNHFLLATINKFGQLRYQDVTMGSMVGNFRTGVGRTNVMQVNPFNGVVSLGHSAGTVTMWKPTSSAPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKVKLWDLRKFEVLQTLPGHANTLDFSQKGLLSCGNGSLIQVLRDVSGTQNYSRYMTHSMVKGYQVEKLVFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRTLLDKLPPETIMLDPSKIGTVKPKGERPTKKEKEAEIEAAVEATKGMKLKKKTKGRNKPGKMIQKKQEAIARVKRPYMEQKIQEEENMSRKKQKTSVELPKSLQRFARKKASS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02120 533 Pfam BING4CT (NUC141) domain 356 434 IPR012952 -
Phac7g02120 533 Gene3D - 119 384 IPR015943 GO:0005515
Phac7g02120 533 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 310 - -
Phac7g02120 533 PANTHER WD-REPEAT PROTEIN BING4 12 528 IPR040315 -
Phac7g02120 533 SMART BING4CT_2 355 435 IPR012952 -
Phac7g02120 533 MobiDBLite consensus disorder prediction 481 518 - -
Phac7g02120 533 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Phac7g02120 533 MobiDBLite consensus disorder prediction 465 533 - -
Phac7g02120 533 SUPERFAMILY WD40 repeat-like 115 383 IPR036322 GO:0005515
Phac7g02120 533 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g02120 533 FunFam U3 small nucleolar RNA-associated protein 7 108 390 - -
Phac7g02120 533 ProSitePatterns Trp-Asp (WD) repeats signature. 295 309 IPR019775 -
Phac7g02120 533 SMART WD40_4 106 144 IPR001680 GO:0005515
Phac7g02120 533 SMART WD40_4 227 266 IPR001680 GO:0005515
Phac7g02120 533 SMART WD40_4 147 184 IPR001680 GO:0005515
Phac7g02120 533 SMART WD40_4 311 345 IPR001680 GO:0005515
Phac7g02120 533 SMART WD40_4 269 308 IPR001680 GO:0005515
Phac7g02120 533 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02120 118 331 U-box Gene Family AT2G33340 24.779 3.02e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02120 K14768 - gmx:100786818 961.059