Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02117 ATGGCGTACCCTGTGAAATATTCATCATCACTTAGGCTTGTCTGTGCTGCTTCAGGTTCTGTACCAAGTGCAGACAAAAGTAGTGCGAACAAGGAAGAGGAGAAGTCTGAGACATATTCTCATAACATGACAGAAGCCATGGGTGTTGTTTTGTCTTATAAGCATGAGTTAGGAATGAACTATAACTTCATCCGTCCAGACTTAATTGTGGGATCATGCCCACAGACTCCTGACGATGTTGAGAAGTTGCGTAGAATTGGAGTGAAAACTATATTTTGCTTACAACAAGATTCGGACCTTGAGGACTTTGATGCATTTGATCTTCGGATGCGGCTTCCAGCTGTAGTTGGCAAATTATATAAGGCAGTAAATTCCAACGGAGGTGTGACATATATTCATTGCACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCAACGGCCTACATGTTTTGGGTTCTGGGTTATACATTTAAGGAGGCTCATACACTACTTCAGAGCAAAAGGGAGTGCTTTCCGAAACTAGATGCCATTAAAAGTGCGACGGCAGACATTCTTACAGGCCTCAGTAAGAAACCTGTCACTTTGTCATGGGAAGACAGCAGTTGCTCTAGGGTGGAAATTTCAGGACTTGATATTGGATGGGGGCAGAGAGTACCCCTAAATTTTGATGACAAATCGGGCTTGTGGTACCTCGAGAGGGAATTACCTGAAGGACGCTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAATAAAGATGAGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTCATTCAAGTCCGTGATAATAGCAGCAGTGATCGTGTTTCCCTTCGGGAGAGATTCTCTTCTGATGATCCTGATCTTACAACGGAGGAACGACTGAGAATAAAGGAGTTTCTTGAAGCTTGTTCTGATGAGGATCTGTGA 948 0.4367 MAYPVKYSSSLRLVCAASGSVPSADKSSANKEEEKSETYSHNMTEAMGVVLSYKHELGMNYNFIRPDLIVGSCPQTPDDVEKLRRIGVKTIFCLQQDSDLEDFDAFDLRMRLPAVVGKLYKAVNSNGGVTYIHCTAGLGRAPAVATAYMFWVLGYTFKEAHTLLQSKRECFPKLDAIKSATADILTGLSKKPVTLSWEDSSCSRVEISGLDIGWGQRVPLNFDDKSGLWYLERELPEGRYEYKYIVDGEWTCNKDELVTSPNKDGHVNNFIQVRDNSSSDRVSLRERFSSDDPDLTTEERLRIKEFLEACSDEDL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02117 315 SUPERFAMILY E set domains 191 274 IPR014756 -
Phac7g02117 315 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 188 278 - -
Phac7g02117 315 CDD E_set_AMPKbeta_like_N 192 273 - -
Phac7g02117 315 SMART dsp_5 60 183 IPR020422 GO:0006470|GO:0008138
Phac7g02117 315 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 57 174 IPR029021 -
Phac7g02117 315 CDD DSP_laforin-like 59 179 IPR045204 GO:0019203
Phac7g02117 315 Gene3D Immunoglobulins 191 278 IPR013783 -
Phac7g02117 315 Gene3D Protein tyrosine phosphatase superfamily 42 190 IPR029021 -
Phac7g02117 315 Pfam Glycogen recognition site of AMP-activated protein kinase 192 276 IPR032640 -
Phac7g02117 315 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 110 168 IPR000387 GO:0016311|GO:0016791
Phac7g02117 315 Pfam Dual specificity phosphatase, catalytic domain 100 171 IPR000340 GO:0008138|GO:0016311
Phac7g02117 315 MobiDBLite consensus disorder prediction 20 39 - -
Phac7g02117 315 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 102 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02117 Phac-Chr7 24231045 24238371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02117 59 315 Protein tyrosine phosphatase (PTP) family AT3G52180 63.028 3.34e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02117 - - pvu:PHAVU_007G145000g 597.43