Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02113 ATGAAGGGTACATTTCTAAAGAAGGAAATCTTCACTCAAAAGAAATTTCCAACTTGTTTGCAAGAAATGGCAACAGGATCAAAGTTTTTGGACACTGCAATAATGGTAGGAGGTTCTCACTCTCTCACTGCCTATCTTCATGTGTTAAGAAGTGGGGCAACCTCATCAATAACATCATCTCAACAACTTCTTTCATGTTCAAATTCTACCTCAATGAAAGAAGAGGCACCTTTAGCCACATGGATTAGTCATATCCCTGCAAAGTTCAATGGCCCTCAAGACATAAAAAATGTCATAGAGAAAAACCAATCCAATTCTATCTTCCCAGCCTCAGATACAAAAAACAGCTCCATTCCTCTAAATCTTTTGGAAACTCTCCCACCATTAACTATGGCACCATGCTTTGATGAGCCAGTTGCTTCTTCAGCCTCTTCTTCTGCCCCACCCAATTTTCCAAACTTGACTTTGGTTTTGCAGGAACCCTCCATGGTGTACTCATCAAATATGAAAGGTGGTGAAGTCATGTCAATAACTTCAGATCCCACCTATCAAGTGCCTCACTTTGGGCAAAACCAGCATCAAGCAGGTAGTGATGCATACAAAATGAACAAGATCAACCTAACAAATTCTCGGTCCAAGTCTTTCAATGAGAATCGGTTGAGTACCACCAGGACTCAGCCTATGAAGTATGGTGGGAGAGGCAAACTGTTTAAAGGGGTGAGGCAGAGACACTGGGGGAAATGGGTGGCAGAGATTAGATTACCAAGAAACAGGACAAGAGTTTGGCTAGGGACTTTTGACACAGCTGAAGATGCTGCCATTGCATATGACACAGCAGCATACATACTGAGAGGAGAATATGCTCAGTTGAACTTCCCAGATCTCAAGCATGTAATCCAGGCCAATTCTCTGAATGGAACCACTGCTGCACTTGTGGAGGCAAAACTACAAGCAATTTCTCAAGGTGTTTCTTCTCAGAGGAAGCCCACTGACTCACCAGCAGGGTCAAGCAATAAGCACAGTGATGAGAATGGAAAATTGAAAAGTACAAATGCCAAGGATTCAACCATGAAGGAGTGGCAGTTTGATACAGATAGAAGCAAAAGTTCACACCATGAGATATCAGATGTGGAAACTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTAGTCTCTAATTCATGA 1209 0.421 MKGTFLKKEIFTQKKFPTCLQEMATGSKFLDTAIMVGGSHSLTAYLHVLRSGATSSITSSQQLLSCSNSTSMKEEAPLATWISHIPAKFNGPQDIKNVIEKNQSNSIFPASDTKNSSIPLNLLETLPPLTMAPCFDEPVASSASSSAPPNFPNLTLVLQEPSMVYSSNMKGGEVMSITSDPTYQVPHFGQNQHQAGSDAYKMNKINLTNSRSKSFNENRLSTTRTQPMKYGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGVSSQRKPTDSPAGSSNKHSDENGKLKSTNAKDSTMKEWQFDTDRSKSSHHEISDVETVQLSRMPSLDMDIIWDELLVSNS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02113 402 MobiDBLite consensus disorder prediction 320 379 - -
Phac7g02113 402 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Phac7g02113 402 MobiDBLite consensus disorder prediction 341 378 - -
Phac7g02113 402 SUPERFAMILY DNA-binding domain 236 294 IPR016177 GO:0003677
Phac7g02113 402 MobiDBLite consensus disorder prediction 320 340 - -
Phac7g02113 402 CDD AP2 235 295 IPR001471 GO:0003700|GO:0006355
Phac7g02113 402 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 90 397 - -
Phac7g02113 402 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Phac7g02113 402 PRINTS Ethylene responsive element binding protein signature 259 275 IPR001471 GO:0003700|GO:0006355
Phac7g02113 402 Gene3D AP2/ERF domain 236 294 IPR036955 GO:0003700|GO:0006355
Phac7g02113 402 FunFam Ethylene-responsive transcription factor 2 235 294 - -
Phac7g02113 402 Pfam AP2 domain 237 285 IPR001471 GO:0003700|GO:0006355
Phac7g02113 402 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02113 Phac-Chr7 24214812 24216504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02113 86 397 AP2-EREBP Transcription Factor Family AT4G13620 42.991 1.69e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g02113 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02113 - - gmx:100820013 611.298