Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g02083 | ATGTCGGATGCGCCAGCCAGCCCGAGTCACGAGAGTGGGGGCGAGCAGAGCCCGCGCGGTTCCTCCTCGGGGGCCAGGGAGCAGGACCGCTACCTTCCTATTGCCAACATCAGCCGCATCATGAAGAAGGGTCTGCCTCCCAACGGCAAGATTGCTAAGGACGCCAAAGATACCATGCAAGAGTGTGTTTCTGAGTTCATCAGCTTCATTACCAGCGAGGCGAGTGAGAAATGTCAGAAAGAGAAGAGAAAGACTATTAATGGAGACGATTTGTTATGGGCAATGGCCACTTTAGGTTTTGAAGACTACATAGAGCCGCTTAAGGTGTACCTGGCAAGGTACAGAGAGGCGGAGGGTGACACCAAAGGATCTGCTAGAGGTGGTGATGGATCTGCTAGACCAGATCAAGTTGGCCTTGCAGGTCAAAATTCTCAGCTTGTTCATCAGGGCTCACTGAACTATATTAGTTTGCAGGTGCAACCACAACATATGGTTTTGCCTTCAATGCAAAGCCATGAATAG | 522 | 0.5096 | MSDAPASPSHESGGEQSPRGSSSGAREQDRYLPIANISRIMKKGLPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAEGDTKGSARGGDGSARPDQVGLAGQNSQLVHQGSLNYISLQVQPQHMVLPSMQSHE* | 174 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g02083 | 173 | FunFam | Nuclear transcription factor Y subunit B-3 | 20 | 144 | - | - | |
Phac7g02083 | 173 | MobiDBLite | consensus disorder prediction | 119 | 138 | - | - | |
Phac7g02083 | 173 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 62 | 78 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Phac7g02083 | 173 | PRINTS | CCAAT-binding transcription factor subunit A signature | 97 | 115 | - | - | |
Phac7g02083 | 173 | PRINTS | CCAAT-binding transcription factor subunit A signature | 78 | 96 | - | - | |
Phac7g02083 | 173 | PRINTS | CCAAT-binding transcription factor subunit A signature | 59 | 77 | - | - | |
Phac7g02083 | 173 | SUPERFAMILY | Histone-fold | 28 | 143 | IPR009072 | GO:0046982 | |
Phac7g02083 | 173 | Gene3D | Histone, subunit A | 18 | 153 | IPR009072 | GO:0046982 | |
Phac7g02083 | 173 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Phac7g02083 | 173 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 31 | 95 | IPR003958 | - | |
Phac7g02083 | 173 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 15 | 141 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Phac7g02083 | 173 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g02083 | Phac-Chr7 | 23929774 | 23935712 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g02083 | 9 | 167 | CCAAT-HAP3 Transcription Factor Family | AT2G37060 | 75.000 | 2.75e-80 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Phac7g02083 | CBFD_NFYB_HMF | 2.5e-28 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g02083 | K08065 | - | gmx:100779577 | 335.495 |