Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02055 ATGAACGGCAGTTCCAGCGAAAGCAAGACCAGGGACATGGACGGGCAGCTGGCGGGGCTGGGCTACAAAGTCCGCTCATCAGAGCTCTGTCAAGTGGCTGAGAATATGGAGCGTTTAGAGAACGCCATCAACACTGTCAACTCATCCAGGGACATTTCTCAAGTAGTCTCCGACGCACTTCTCTACGATCCCTCCAACATAGGTTTAGGTTCCTGGGTCGACACGCTTCTCTCCGAGCTGGACCAAACCGTGTCGTTGCCCTACGATCTGTCTTCTGACCTACCCGATTTGCCCACGGATCCGAACCGCCAACTGGGGATGGTAACCACGGTCGAAGAAGACTCCGGGATAAGACTCGTTCACACACTCATAACGTGTGCGGATTCTGTGCAACGTGGCGACCTCGCATTCGCTGGCTCCCTCATCGACAGCATGCAGGCCCTGCTGGCTCACGTGAACACCTCCTGCGGCATCGGGAAGGTTGCCGGCTACTTCATCGACGCCTTGCGCCGCCGAATCTCGTCTCCGCAAAACGCTGCGTTCCCAACCTCCCCCTACGAGAACGACGTTCTCTACCACCACTACTACGAGGCCTGCCCGTACCTTAAGTTCGCACACTTCACTGCGAACCAGGCGATCCTGGAGGCGTTCAACGGCCACGACTGCGTCCACGTCATCGACTTCAACCTGATGCAGGGGCTCCAGTGGCCGGCGCTCATTCAAGCGCTTGCGCTCCGCCCGGGAGGTCCGCCGTCGCTGAGGCTGACCGGTGTGGGACCTCCCTCGCCGGACGAGCGAGACACACTGCGCGAGATCGGCGCGCGGCTGGCGGAGCTGGCGCATTCGGTGAACGTGCGTTTCACGTTCCGCGGAGTAGCGGCGTGGCGGCTGGAGGACGTGAAGCCGTGGATGCTGCAGGTGAGTCCGAAGGAAGCGGTGGCAGTGAACTCGATCATGCAGCTACACCGCGTGCTTGGTTCGGGAATCGATGCGGTTCTCGGGTGGATCCGAAGTCTAAACCCTAAGATCGTGACGGTTGTGGAGCAGGAAGCGAACCACAACGGGGAGGGGTTTCTGGAACGGTTCACGGAGGCTCTGCACTACTACTCCACCGTCTTCGACTCGTTGGAAGCGTGTTCGGTGGAGCCGGACAAGGGTCTCGCCGAGATGTATCTGCAGAGGGAGATTTGCAACGTGGTGAGCTGTGAGGGACCGGCGCGAGTGGAGCGGCACGAGCCGCTGGCGAAGTGGAGGGAGCGGCTGGCTAAGGCCGGCTTGAGGCCCTTGCATTTGGGTTCGAACGCTTACAAACAAGCCAGCATGCTTTTGACTCTCTTCTCAGCCGAGGGTTACTGCGTGGAAGAAAATCAAGGGTGTTTGACTCTGGGTTGGCACAGCCGGCCTCTGATTGCGGCTTCGGCTTGGCAAGCCGCGCCGCTAAGAGAGGGTGAAACGGTGCGTTTTCAGCGTTGA 1473 0.5974 MNGSSSESKTRDMDGQLAGLGYKVRSSELCQVAENMERLENAINTVNSSRDISQVVSDALLYDPSNIGLGSWVDTLLSELDQTVSLPYDLSSDLPDLPTDPNRQLGMVTTVEEDSGIRLVHTLITCADSVQRGDLAFAGSLIDSMQALLAHVNTSCGIGKVAGYFIDALRRRISSPQNAAFPTSPYENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPSLRLTGVGPPSPDERDTLREIGARLAELAHSVNVRFTFRGVAAWRLEDVKPWMLQVSPKEAVAVNSIMQLHRVLGSGIDAVLGWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLEACSVEPDKGLAEMYLQREICNVVSCEGPARVERHEPLAKWRERLAKAGLRPLHLGSNAYKQASMLLTLFSAEGYCVEENQGCLTLGWHSRPLIAASAWQAAPLREGETVRFQR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02055 490 Pfam Transcriptional regulator DELLA protein N terminal 14 83 IPR021914 -
Phac7g02055 490 Gene3D - 12 80 IPR038088 -
Phac7g02055 490 SMART DELLA_2 14 90 - -
Phac7g02055 490 ProSiteProfiles GRAS family profile. 110 476 IPR005202 -
Phac7g02055 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 472 IPR005202 -
Phac7g02055 490 Pfam GRAS domain family 119 476 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02055 Phac-Chr7 23257190 23258662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02055 5 476 GRAS Transcription Factor Family AT1G14920 47.013 5.41e-158 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac7g02055 GRAS 9.7e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02055 K14494 - gmx:100803245 773.852