Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02025 ATGGTAACGTTGGAGCTATGTGGGTTTGACTTTTATTTTATTTTATTTTTTGCTCTCTTGCTTGCAATTACAACAAGTGAAGGAAACCTAGGAGGGCAAAACCAAAACCCCAATCAGCTACATAGCCTTTGGAAAAAAGAAGGTAGCTCACAGGTCAATTTTGCGTTTTCTGTAACTCTGGCAAATCCTTGGTGGACAGGCCAGGGGGGGTTATCTGGGGTTGACCCAGGAACCCATTCACCTGGCCTAAGCAAACGCCACACAGACCTTGTAATCAATGAAACCAGTGGTGGTCATGATATAGAAGAAGATGAAGACAATAGAGATGAACCGAAAGAGGGTGCAGTTGAGGTTGGAACCCGCAGACCAAGAGGAAGACCTCCTGGATCAAAAAACAAGCCAAAACCACCCATTTTTGTAACAAGGGACAGCCCAAACGCCCTGAGGAGTCATGTGATGGAGATAACTGGAGGAGCTGATGTTGCCGAAAGTGTAGCCCAGTTTGCAAGAAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGAAGTGGCTCCGTGGCAAATGTTACTCTTAGACAACCTGCTGCTCCTGGAGCTGTTGTGGCACTTCATGGGAGGTTTGAGATTTTGTCCCTCACTGGGACTTTCTTACCTGGTCCAGCTCCTCCAGGATCCACAGGACTCACAGTGTATCTTGCTGGAGGACAGGGCCAAGTACTAGGAGGGAGTGTGGTTGGGCCTCTAGTTGCAACAGGACCAGTGATGGTGATTGCTGCAACTTTTGCTAATGCAACATATGAGAGACTTCCACTTGATGAAGATGACGAGGGGCCTAGTTCCGCCGCTGCTGTACAAGGAGGAGGATCACCGCCGCCACTTGGAATTGGAAGCGGTGGGGGCGTCCAGTTGCAGGGTGGGATGCCAGATCCATCATCTTTGCCTTTGTATAATCTTCCACCAAATGGAGGAGGGGGGCAAGTGGGGCATGAAGCCCTTGCTTGGGCTCATGGACGGCCACCTTTCTGA 1023 0.5005 MVTLELCGFDFYFILFFALLLAITTSEGNLGGQNQNPNQLHSLWKKEGSSQVNFAFSVTLANPWWTGQGGLSGVDPGTHSPGLSKRHTDLVINETSGGHDIEEDEDNRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVLGGSVVGPLVATGPVMVIAATFANATYERLPLDEDDEGPSSAAAVQGGGSPPPLGIGSGGGVQLQGGMPDPSSLPLYNLPPNGGGGQVGHEALAWAHGRPPF* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02025 340 ProSiteProfiles PPC domain profile profile. 145 282 IPR005175 -
Phac7g02025 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 261 IPR005175 -
Phac7g02025 340 Gene3D - 148 275 - -
Phac7g02025 340 MobiDBLite consensus disorder prediction 96 145 - -
Phac7g02025 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 97 335 IPR014476 GO:0003680
Phac7g02025 340 FunFam AT-hook motif nuclear-localized protein 148 275 - -
Phac7g02025 340 MobiDBLite consensus disorder prediction 269 321 - -
Phac7g02025 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 273 - -
Phac7g02025 340 CDD DUF296 149 260 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02025 Phac-Chr7 22480519 22482722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02025 60 340 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.616 5.45e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02025 - - var:108341460 484.182