Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02010 ATGGATGAGGAGGGATCAAGGGGAAAACCCAAGGAGGAGGCTGGAGACGTCCGGTACCGGGGGGTCCGGCGGCGGCCCTGGGGGAAGTTCGCGGCGGAGATTCGAGATTCCGCCAGGCAAGGCCAAAGGGTGTGGTTGGGAACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGATAGAGCTGCTTATACCATGAGAGGTCCATTTGCAATCTTGAACTTCCCTGAGGAGTACCCTATGACTGCTGGTGGTGCCACTAATGCTGCCACTCATTCCTCTGTTGCTTCTTCATCCTCAACCTCCTCTTCTTCTTGGAATGCAAATGCGGAAGGCAGAGGAAGAAGTGATCAAGGAAGACAAGTGTTTGAGTTTGAGTACTTGGATGACAAGTTGTTGGAGGAGCTTCTTGACTTTGATGAGGACAAAAAGAAAAGGGGCCCCTGA 447 0.5302 MDEEGSRGKPKEEAGDVRYRGVRRRPWGKFAAEIRDSARQGQRVWLGTFNTAEEAARAYDRAAYTMRGPFAILNFPEEYPMTAGGATNAATHSSVASSSSTSSSSWNANAEGRGRSDQGRQVFEFEYLDDKLLEELLDFDEDKKKRGP* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02010 148 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Phac7g02010 148 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 MobiDBLite consensus disorder prediction 86 114 - -
Phac7g02010 148 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Phac7g02010 148 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Phac7g02010 148 MobiDBLite consensus disorder prediction 82 119 - -
Phac7g02010 148 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Phac7g02010 148 PANTHER DNA-BINDING DOMAIN 13 143 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02010 Phac-Chr7 22163245 22163994 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02010 18 144 AP2-EREBP Transcription Factor Family AT3G23230 61.417 2.18e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g02010 AP2 4.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02010 - - gmx:100775830 198.749