Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01970 ATGAGAGCTAAGAGTTTAATAAGTAAAAAGCAGATTAGCCTAAGATTGAGAAAAATGATAAAGTGTATGTGCTCTGGGGAACAGTTGAAGGTAGATGAATTAGGTTACTCATCGGAATCCCTAGCAACAAGAGATTATTCAGCAAGTGGTGGGTATTCATCTCGACCTGGTGAAAACGACACAAAGGTTGACAACACCAACATTGAAGAAGCAGAGTCTTCTCTTCGTGAAAGTGGTTATTTAAACTACGAGGAAGCTAGAGCTTTGCTTGGAAGACTTGAGTATCAGAAAGGCAATGTCGAAGCTGCACTTCATGTGTTTGAAGGAATAGATATTGCTACTGTCGTTCCCAAGATCAAAGTTTCTATATCTAGAAGTTGTGAACCTAATAGACGCCGTTCGCAAAGTGATACTCACCCTCCTATGTCAATGCATGCTGTTAGTTTAATTCTTGAAGCTGTCTTTCTCAAGGCCAAATCGTTGCAGGCTCTAGGAAGGTTTCAAGATGCTGCTCAGTCATGCAAGATAGTTTTAGACACTGTCGAATCAGCTTTACCAGAAGGCTGGCCTGAAAACTTCGTTTCAGACTGTAAACTGCAAGAGACAGTGGCAAATGCTGTGGAACTGCTTCCAGAGTTATGGAAGCTTACAGGCTCTGCTCAAGATGTCATCTCATCGTTTAGGAGGGCCCTGCTTTATCATTGGAATCTTGGCACTAAAGCCACGACAAGAATACAAAAGGAATTTGCTTTTTTTCTTCTGTATAGTGGTTGTGAAGCTAGCCCTCCTGCTCTCCGCTCTCAGTTGGATGGTTCCTTTGTGCCAAGAAGCAACCTAGAAGAGGCTGTTCTTCTGCTTCTGATTTTGCTGAGAAAATCTATTCTTGGATACATTGTATGGGACCCTTCATTAATTGATCACCTTTCTTTTGCTTTAAGTGTTTCTGGGGAATTCATGACTCTAGCTCAGCAGGTTGAGGAATTGCTTCCTGAAAACATGGACAGAAAAGAAAGATACTATACTCTAGCTCTTTGTTACTGTGGAGAAGGTGAACATACGACTTCTTTGGATCTTCTAAGGAACTCTTTGAATCATAGAGAGAACTCAGACTGCATAAAGGAGTTACTTCTAGCTTCAAAAATTTGTGCAGAAAAGAATATTTACACTGAAGAAGGAATCAAATATTCTTTCAAATCCATTTCTCAGTTGAATGGAAAGTGCATGCAGATGGTAGCTATTGCAAATTGCTTGCTAGGTGTTCTACTGTCATCAAAATCCAAGTCAGCTGCTTCTGAATCGGAGAAGGTTTTTTTGCAGTCTGAAGCTCTCAGTGCTCTAAAAGATTCCGAGAGAACGATGAGGGAAAGTGATCCTTACATTGTCCTTCATCTTTGTCTAGAGTATGCTGAACAGAGGAAGTTAAACATTGCTATTGATCATGCAAAGAAACTGATTAAGCTTGAGGGTGGATCTAGTGTTAGAGGATATATTCTACTAGCGCGGATTTTATCTGCTCAACGAAAGTTTGAAGATGCAGAGCTTGTTATAGATGCTGCTCTAGATCAAAGTGGGAAATGGGATCAAGGAGAATTGTTGAGAACTAAAGCTAAACTACGGATTGCACAGGGAAAATTAAATAATGCAGTGGAAACATACACTTTTCTTCTTGCTGTTCTTCAGGTCCAAAATAAAAGTTTAGGCACGGCAAGTAAGAGTAAGGGAAACCGTGACAGAAGACTGGAAATGGAAATATGGCACGATTTAGCCAATGTGTACGCGACCTTATCGCAGTGGCGGGATGCTGAAGTTTGTCTAGCAAAATCTGAGAATATTAATCCCTATTCTGCTTCTAGATGGCACACAAAGGGTTTACTTTTTGAAGCCAGAGGTCTTCATCAAGAGGCTCTGAAATCATTTAGGAAAGCATTAGATATTGAGCCCAACCATGTGCCAAGTTTGATATCCACAGCCTGTGTACTCAGGCAACTTGGTGGTCAATCATCTTCGATAGTTAGAAGCCTTCTCACTGATGCATTGCGCCTTGACAGAACAAACCCATCAGCTTGGTACAATCTTGGACTTTTCTACAGAGCTGATTTGGGGACATCGGCAATGGAAGCTGTTGAATGCTTTGAAGCAGCAGCTTTTCTTGAAGAATCTACTCCTATTGAACCCTTTAGATAA 2184 0.4089 MRAKSLISKKQISLRLRKMIKCMCSGEQLKVDELGYSSESLATRDYSASGGYSSRPGENDTKVDNTNIEEAESSLRESGYLNYEEARALLGRLEYQKGNVEAALHVFEGIDIATVVPKIKVSISRSCEPNRRRSQSDTHPPMSMHAVSLILEAVFLKAKSLQALGRFQDAAQSCKIVLDTVESALPEGWPENFVSDCKLQETVANAVELLPELWKLTGSAQDVISSFRRALLYHWNLGTKATTRIQKEFAFFLLYSGCEASPPALRSQLDGSFVPRSNLEEAVLLLLILLRKSILGYIVWDPSLIDHLSFALSVSGEFMTLAQQVEELLPENMDRKERYYTLALCYCGEGEHTTSLDLLRNSLNHRENSDCIKELLLASKICAEKNIYTEEGIKYSFKSISQLNGKCMQMVAIANCLLGVLLSSKSKSAASESEKVFLQSEALSALKDSERTMRESDPYIVLHLCLEYAEQRKLNIAIDHAKKLIKLEGGSSVRGYILLARILSAQRKFEDAELVIDAALDQSGKWDQGELLRTKAKLRIAQGKLNNAVETYTFLLAVLQVQNKSLGTASKSKGNRDRRLEMEIWHDLANVYATLSQWRDAEVCLAKSENINPYSASRWHTKGLLFEARGLHQEALKSFRKALDIEPNHVPSLISTACVLRQLGGQSSSIVRSLLTDALRLDRTNPSAWYNLGLFYRADLGTSAMEAVECFEAAAFLEESTPIEPFR* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01970 727 SUPERFAMILY TPR-like 530 697 IPR011990 GO:0005515
Phac7g01970 727 MobiDBLite consensus disorder prediction 45 61 - -
Phac7g01970 727 ProSiteProfiles TPR repeat profile. 616 649 IPR019734 GO:0005515
Phac7g01970 727 PANTHER PROTEIN NPG1 20 727 IPR043376 -
Phac7g01970 727 MobiDBLite consensus disorder prediction 45 65 - -
Phac7g01970 727 Gene3D Tetratricopeptide repeat domain 581 723 IPR011990 GO:0005515
Phac7g01970 727 Gene3D Tetratricopeptide repeat domain 150 580 IPR011990 GO:0005515
Phac7g01970 727 Pfam Tetratricopeptide repeat 617 649 IPR019734 GO:0005515
Phac7g01970 727 SMART tpr_5 151 184 IPR019734 GO:0005515
Phac7g01970 727 SMART tpr_5 336 369 IPR019734 GO:0005515
Phac7g01970 727 SMART tpr_5 582 615 IPR019734 GO:0005515
Phac7g01970 727 SMART tpr_5 493 526 IPR019734 GO:0005515
Phac7g01970 727 SMART tpr_5 616 649 IPR019734 GO:0005515
Phac7g01970 727 SUPERFAMILY TPR-like 325 552 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01970 Phac-Chr7 20559413 20564358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01970 16 727 Calmodulin-binding Proteins AT4G28600 52.675 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01970 K21843 - gmx:100789469 1241.48