Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01904 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGTAAGAACCAGTGGGCTCGAATCTCTTCACTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTCGATCCCTCCATAAAAAAAACTGAGTGGACTAGAGAAGAGGACGAAAAGCTACTTCATCTTGCCAAGCTTATGCCCACTCAATGGAGAACAATTGCTCCAATTGTGGGCCGCACCCCTTCCCAGTGTCTTGAGCGGTATGAGAAGCTCCTTGATACAGCCTGTGTGAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGGAAATTGCGTCCTGGGGAGATTGATCCAAATCCTGAGTCAAAACCTGCACGACCTGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAACACGAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAGAAGAAGAGAGAATTGAAGGCTGCAGGAATTGATATTAGGAAGCGGAAGAGAAAGAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAGAAAAGGCCTCCTTCAGGCCTTTTTGATGTTACGGATGAAGATAGACCAGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAACTTGAAGGTAAAAGGAGGGTTGATATTGAGGCACAATTAAGAAAGCAGGACATCGCAAAAAATAAAATTGCAGAAAGGCAAGATGCCCCATCTGCCATATTGCATGCCAACAAGCTGAATGACCCAGAAACAGTAAGAAAGAGGTCAAAATTGATGCTTCCGCCACCCCAGATTTCTGATCAGGAATTGGATGAAATTGCAAAGTTGAGTTATGCTGGTGACCTTATAGGGAGTCAGGAACTTGCTGAAGGTAATAGTGCAACACGGGCACTTCTGGCTAATTACGAGCAGACACCTGGTCACGGAGCGACTCCTCTCCGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATTTGGCCAGGTTGAGGGAGTCTCAAACACCATTGTTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCGGGTGTCACCCCTAAGAGAAAAGACATTCCGACACCAAATCCAATGCTGACACCTTCTGCAACTCCTGGAGGTGCAGGTCTCACTCCTAGAATTGGCGTGACACCATCAAGAGATGGTTCTTTTAGCATGACACCAAAGGGAATTCCTCTTAGGGATGAGCTACATATTAATGAGGGCACGAATATGCTTGACAGCTCTAAACTTGAGCTACATAGACAGGCTGATATGAGGAGAAGTTTGCAATATGGTTTAGGAAGCCTTCCACAGCCCAAAAATGTGTACCAAATAGTGATGGAACCAGTTCAAGAAGACACAGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAAAAGGAAGAAGAGGCAAGACAACAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAACGGGAACTTCCTAGGCCTCCTGCTGCATCATTGGAGCTCATAAGAAATTCCTTGATGAGAATTGATGGGGACAAAAGTTCGTTTGTTCCACCAACTTCTATTGAACAAGCTGATGAGATGATTAGAAGAGAGCTTCTAACTTTACTGGAGCACGACAATGCTAAGTATCCCTTTGATGATAAAGTGAATAAGGAGAAAAAAAAAGGAGTCAAACGAGCCGCAAATGGGTCTGCCGTCCCTGTGATTGAAGATTTTCAGGAAGATGAAATGAAAGATGCTGATAAGTTGATAAAGGAAGAGGCCCAGTATGTTTGTGCAGCAATGGGACATGAAAATGAACCTCTCGATGAATTTATTGAAGCACACAGAACCTGTCTCAATGATCTCATGTACTTTCCTACTCGTAATGCGTATGGTCTTTCTAGTGTTGCCGGGAACATGGAAAAACTAACAGCTTTACAGAATGAATTTGAGAACTTAAGAAACAAATTAGATGATGGTAATGAGAAGATGGTACGGTTTGAGAAGAAGGTGTTGGTTCTCACACAAGGCTATGAGATGAGGGTAAAGAAAAGCCTCTGGCCGCAAATTGAGGCCACTTTTAAGCAGATGGACATAGCTGCGACTGAATTAGAATGCTTTAAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCATCACGTAGGATACACAATCTATGGGCTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTTCGCAAAATATGTACGGGAGTCTAATTAAAGAGCTGGAGAAGGTGCAAAATATCATGGACCGATGCAGATTACAAGCACAACAAGAGATTGAAGCAAACAAGCATGCTCCTGAGTCAACTGAGATCACCGAGACCACCCATAAAACTGATGTACAGGGTACAGAGAATTGTGAAGTTGTACCGCACTCGGAGGAGAATGGAAATGCTCTAGCACGTGATGGAACTGCTGACCAGCAAGTAGATATTGTGCAGGACCAGGCTACTTCTAGCCCCAGTTATGACATGGATGTAGATTCTCATAAAATGCAAACGATACATGACACTAATGTTAAATTTACAAATGCTTCACCAGCTGCTGGGAATGTTGCACAAAAAATGGATGGTACCAGTACTACTGAAGGCAATGCTGACAATGGGGAGGCCATGCCAGAAATGGGTGGTATAGTGGAAACAAGTAGCCTCAATCATGGTGTATTTGCAGATGCTGTAAACCCACGTGACAGCAGCTTGGAAGAATCCAATGCTGTCGGGGAGGAGACAAATTAG 2895 0.4387 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRKRKRKRKGIDYNAEIPFEKRPPSGLFDVTDEDRPVEQPKFPTTIEELEGKRRVDIEAQLRKQDIAKNKIAERQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLSYAGDLIGSQELAEGNSATRALLANYEQTPGHGATPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKDIPTPNPMLTPSATPGGAGLTPRIGVTPSRDGSFSMTPKGIPLRDELHINEGTNMLDSSKLELHRQADMRRSLQYGLGSLPQPKNVYQIVMEPVQEDTEEPEEKIEEDMSDRIAREKKEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRIDGDKSSFVPPTSIEQADEMIRRELLTLLEHDNAKYPFDDKVNKEKKKGVKRAANGSAVPVIEDFQEDEMKDADKLIKEEAQYVCAAMGHENEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLTALQNEFENLRNKLDDGNEKMVRFEKKVLVLTQGYEMRVKKSLWPQIEATFKQMDIAATELECFKALQKQEQLAASRRIHNLWAEVQKQKELEKTSQNMYGSLIKELEKVQNIMDRCRLQAQQEIEANKHAPESTEITETTHKTDVQGTENCEVVPHSEENGNALARDGTADQQVDIVQDQATSSPSYDMDVDSHKMQTIHDTNVKFTNASPAAGNVAQKMDGTSTTEGNADNGEAMPEMGGIVETSSLNHGVFADAVNPRDSSLEESNAVGEETN* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01904 964 FunFam CDC5 cell division cycle 5-like 5 59 - -
Phac7g01904 964 SMART sant 58 105 IPR001005 -
Phac7g01904 964 SMART sant 6 55 IPR001005 -
Phac7g01904 964 Pfam Myb-like DNA-binding domain 10 70 - -
Phac7g01904 964 CDD SANT_CDC5_II 55 106 IPR047240 -
Phac7g01904 964 MobiDBLite consensus disorder prediction 950 964 - -
Phac7g01904 964 FunFam CDC5 cell division cycle 5-like 60 120 - -
Phac7g01904 964 Coils Coil 167 187 - -
Phac7g01904 964 MobiDBLite consensus disorder prediction 945 964 - -
Phac7g01904 964 Gene3D - 60 114 - -
Phac7g01904 964 Coils Coil 681 715 - -
Phac7g01904 964 MobiDBLite consensus disorder prediction 110 150 - -
Phac7g01904 964 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Phac7g01904 964 MobiDBLite consensus disorder prediction 899 927 - -
Phac7g01904 964 MobiDBLite consensus disorder prediction 380 423 - -
Phac7g01904 964 Pfam pre-mRNA splicing factor component 406 653 IPR021786 -
Phac7g01904 964 Gene3D - 5 59 - -
Phac7g01904 964 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Phac7g01904 964 CDD SANT 10 53 IPR001005 -
Phac7g01904 964 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Phac7g01904 964 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Phac7g01904 964 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Phac7g01904 964 MobiDBLite consensus disorder prediction 899 920 - -
Phac7g01904 964 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 801 IPR047242 GO:0000398|GO:0000974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01904 Phac-Chr7 18960792 18966057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01904 1 814 MYB-Related Transcription Factor Family AT1G09770 75.030 0.0 1199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g01904 Myb_Cef 1.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01904 K12860 - gmx:100790369 1562.36