Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01882 ATGGATACCCTTTTCTTCACTCCATGCGCAAACTTGGAATACTCTTTCGATCACTCTTCTATGTTCCCATCACATCATCACCAATCTCTTCTTTCCTCTTATGAAAATGGCTTCCTGGAAATGCTTCTTCATTCCTGTGAAACACCATCTGAACCTCGTTATGAGGAGAAACATGAGGTTTCCTACAGAGGGGTTCGAAAGCGGGGACGTGGCAACTTCGCGGCGGAGATAAGGGACTCTACGAGGAACGGGGCGACGGTTTGGTTGGGAACCTTCAACACTGCCGAGGATGCTGCTTTGGCTTACGACCAAGCTGCAATAACAACGCGTGGCGACAAAGCTGTTCTCAATTTCCCTCCTCGACTCGTTCTGCAATCGCTGCACAACATGGACTTCAGGTTCCAGAGAGGGCTCTCTCCCATTCTGGAACTGAAGAAGAGAAACTTCGTGAAGAGGAGGGTGGAGTGCATGAGGAGAAAGAATCACAGGCATATCGGAGTGGAAAATATTGTGGTTTTGGAAGATCTGGGAGCAGATTATTTGGAAGAGCTTCTCACACTGACTGAACATTAA 573 0.4782 MDTLFFTPCANLEYSFDHSSMFPSHHHQSLLSSYENGFLEMLLHSCETPSEPRYEEKHEVSYRGVRKRGRGNFAAEIRDSTRNGATVWLGTFNTAEDAALAYDQAAITTRGDKAVLNFPPRLVLQSLHNMDFRFQRGLSPILELKKRNFVKRRVECMRRKNHRHIGVENIVVLEDLGADYLEELLTLTEH* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01882 190 ProSiteProfiles AP2/ERF domain profile. 61 119 IPR001471 GO:0003700|GO:0006355
Phac7g01882 190 PANTHER DNA-BINDING DOMAIN 53 136 IPR044808 GO:0003700|GO:0009873
Phac7g01882 190 SMART rav1_2 61 125 IPR001471 GO:0003700|GO:0006355
Phac7g01882 190 Pfam AP2 domain 62 108 IPR001471 GO:0003700|GO:0006355
Phac7g01882 190 CDD AP2 62 119 IPR001471 GO:0003700|GO:0006355
Phac7g01882 190 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Phac7g01882 190 Gene3D AP2/ERF domain 61 120 IPR036955 GO:0003700|GO:0006355
Phac7g01882 190 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Phac7g01882 190 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01882 Phac-Chr7 18540412 18540984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01882 57 190 AP2-EREBP Transcription Factor Family AT3G23240 52.174 1.24e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g01882 AP2 2.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01882 K14516 - han:110904536 153.295