Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01858 ATGAACTGCTTCCCTTGTTGTGCCCCTAAGAAAAGCCTAAGCAAGAGGGAGCATGAGCCTCCACCACCCGAACCTGTACCAGTAAAAGCACCAGAAGTGAAGAAACAAAAATCGGATGACCAAATGGCAGTTGACCCAGAAAATATTAAGGTAAAGGCTTTTACGTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGATTGCCTGTTGGATGAAGGAGGTTTTGGAAGACTATACAAAGGAATAATTCCTGCCACCGGCCAGATTGTGGCCGTGATGCAACTCGACCGAAATGGGATCGGTAAGGAATTTCTGGGTGATGTTGCGGAGCTAAGTATGTTGCAGCACGAAAATCTGGTGAATCTCATTGGTTATTGTTCCGATGGAGATCAACGTCTTTTGGTTTACGAGTTGTTTGCTGGGCGCACTCTAGAAAACCGTCTTTTTGAGAATAAAGCGGATGAAGGGCCATTAAGCTGGTATGACAGAATGAAAATAGTTGCGGGTGCTTCTAAAGGGCTAGAGTACTTGCACGAGAGTGCGGACCCCCCAGTTATATTCAGGGACATGAAAGCGTCGAGCATCTTGGTGGACAATGATTTCAATGCTAAACTGCGTGATGTTGGAATGGCCAAGCTTTCTGGTGCAGACAAGATGAACAATGGACCTCCAAGACTTATGGGTACCTATGGTTACTGCGCTCCGGAGTACGTTAGAGCAGGTCAAGTCAGCATGAAATCAGATGTTTACAGTTTCGGAGTTATCTTGCTAGAGCTCATTACTGGACGAAGAGCCGTTGACACCACAAGACCAAATGAAGAGCAGAATCTAGTTGCATGGGCAACACCCTTATTCAGGGACCCGAAGAGATATCCAGACATGGCAGATCCGGTTCTTAATAAGAATTTCCCAGCAAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCCCGTCCTTTGATCAGTGACGTTGTAACTGCTCTCAGTTTTCTTTCCGCTGCTCCTGTTGCTGCACCCCGAAAGAGTAGTGCTGGTGAAAGCGATGGTGAAGCAGTATCTAGAAAGGGGAGCCGTAGATCATCAGTAGATAGCCAACATGGTTCTGATGGCCAACTTCCACCAGCGATGTCCTCTAAACCTAGCCGCAAAAGCAGCAGCAGATCAAGGAAGGGAACAGATTCAGGAGATGGAAGCGTTTCTTCCAGCAGTGGGAAATCGCCGGGTGATTTAAGCCACAAGAGCAGCAAAAAATCTTCACTAAAACTGTTAAGCCAGAAGATAAGCGAAAAATCTTCTGAGGAAGATTTAAACCGGAAGAGCAGCAAAAAGTCCTCCACCAAAGATTTAAGCCAGAAGAAGAGCAGCAAAAAATCTTCCATTTTGGGCCACAAGAGCAGTAAGAAATCTTCCAGAAGAGTTTCGAGCCACAAGAGTAGCAAAGATTCAGACGATGGAAGCATTTCCTCAAGCTGCCGTAGCAGCAGTGTGGCCTCAGATGATGATGTGTCAGAGCGTAGCAGCATTAGGCTCGCTGACTCCATTAACAACAGCAGAAGGACAGAGGATGGGATATTAGACCGTGAAAGCACCATGGAATCTGATGTGGGAAGTGGTCACCCTTTTGACCAAACTAGCAGCAGTGGATCAAGTGTTTATTCTCGATAA 1695 0.4625 MNCFPCCAPKKSLSKREHEPPPPEPVPVKAPEVKKQKSDDQMAVDPENIKVKAFTFRELATATKNFRQDCLLDEGGFGRLYKGIIPATGQIVAVMQLDRNGIGKEFLGDVAELSMLQHENLVNLIGYCSDGDQRLLVYELFAGRTLENRLFENKADEGPLSWYDRMKIVAGASKGLEYLHESADPPVIFRDMKASSILVDNDFNAKLRDVGMAKLSGADKMNNGPPRLMGTYGYCAPEYVRAGQVSMKSDVYSFGVILLELITGRRAVDTTRPNEEQNLVAWATPLFRDPKRYPDMADPVLNKNFPAKDLNQVVAIASMCLQEEAEARPLISDVVTALSFLSAAPVAAPRKSSAGESDGEAVSRKGSRRSSVDSQHGSDGQLPPAMSSKPSRKSSSRSRKGTDSGDGSVSSSSGKSPGDLSHKSSKKSSLKLLSQKISEKSSEEDLNRKSSKKSSTKDLSQKKSSKKSSILGHKSSKKSSRRVSSHKSSKDSDDGSISSSCRSSSVASDDDVSERSSIRLADSINNSRRTEDGILDRESTMESDVGSGHPFDQTSSSGSSVYSR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01858 564 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
Phac7g01858 564 SUPERFAMILY Protein kinase-like (PK-like) 46 341 IPR011009 -
Phac7g01858 564 Pfam Protein kinase domain 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01858 564 MobiDBLite consensus disorder prediction 346 564 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 437 464 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 373 392 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 525 543 - -
Phac7g01858 564 ProSiteProfiles Protein kinase domain profile. 66 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g01858 564 MobiDBLite consensus disorder prediction 357 372 - -
Phac7g01858 564 PANTHER OS07G0668900 PROTEIN 3 350 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 401 419 - -
Phac7g01858 564 Gene3D Transferase(Phosphotransferase) domain 1 142 343 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 546 564 - -
Phac7g01858 564 FunFam Serine/threonine-protein kinase PBS1 141 356 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 11 42 - -
Phac7g01858 564 MobiDBLite consensus disorder prediction 467 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01858 Phac-Chr7 17216766 17219878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01858 1 345 Glycoside Hydrolase AT3G07070 55.647 1.70e-141 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac7g01858 Pkinase 6.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01858 - - pvu:PHAVU_007G115500g 884.789