Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01841 ATGAGGAGTGGTGATGGTCAGAGACTAATCATAGATGCGTTGGCATATATCAAGAAAATAAAGGAAGTGTTTTCAGATAAGACAGAAAAGTATTATGACTTTCTGGAAATTATGTGGGATTTCAAGGCTCAAAGAATTGATACAGCAGGTGTCGTAGCAAGAGTGAAGGAATTGTTTAAAGGGCAAAAAGATCTAATTTTGGGATTGAACACTTTCTTGCCACCTGAATATGAAATTACACTGCCATTGGAGGATGAACTACCTCACAAAAAGAAATCTAGTTGTAGGGTTCAAGATTCTGGTGCCAATCATGATACTGATGAAAATGTTGGCATACATCCTAGTTCATCTGCTGTTGAAAATGTTGGCATACACCCTAGTTCATCTGCTATTGAGGATATAAGTTCTATGAAAAGTGGGCAATCTATTTGGACAATATGCAGATCTTATGGAGGGATTTAA 462 0.3701 MRSGDGQRLIIDALAYIKKIKEVFSDKTEKYYDFLEIMWDFKAQRIDTAGVVARVKELFKGQKDLILGLNTFLPPEYEITLPLEDELPHKKKSSCRVQDSGANHDTDENVGIHPSSSAVENVGIHPSSSAIEDISSMKSGQSIWTICRSYGGI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01841 153 PANTHER SIN3B-RELATED 12 98 IPR039774 GO:0003714
Phac7g01841 153 Gene3D Paired amphipathic helix 12 74 IPR036600 GO:0006355
Phac7g01841 153 FunFam Paired amphipathic helix protein Sin3 12 74 - -
Phac7g01841 153 Pfam Paired amphipathic helix repeat 29 73 IPR003822 GO:0006355
Phac7g01841 153 ProSiteProfiles PAH domain profile. 2 76 IPR003822 GO:0006355
Phac7g01841 153 SUPERFAMILY PAH2 domain 10 75 IPR036600 GO:0006355
Phac7g01841 153 MobiDBLite consensus disorder prediction 95 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01841 Phac-Chr7 16326362 16327778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01841 12 88 WRKY Transcription Factor Family AT4G12020 54.545 1.01e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac7g01841 PAH 5.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01841 K11644 - gmx:100813398 134.42