Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01825 ATGTGCCAACAATCTCTTGCCCCGGAGTTGGATTTGTTACATGCTTCTCCTACCAAAGTTATTGAACAAGTGCATTCGTCCAATTCCAATGATGTGAAAATGTTGAAGTTTCCCTTTGATCTTAATGCAAAATTTGATGAGGAGGATCAAATTTCTTGCTCCAATGAAGCACATGCCAAAGTTGGTTGCAGTGAAGCCATTCAGCCTTTACCTTCATCTTATTTGGAGGTCACTCCAGAAGATGTTCTTCCTACAGACAATGATAATGAGGATAGATCCAGTGTTGTTGGGGGAGGATCACACACTTCTCAGAACAGGAAGAGAAAGAGATCAGTTGAGGAATGTGAGAAAGGGAGAGGGAAGGCTTTTCGTAGAGACAATGTGGAAGTGAAGATTAAGAGACAAAAGGAGAATACAGTAGATGATGGTTATCAATGGAGAAAATATGGTCAAAAGCCTATTAAGGGAAGTGTATTCCCTAGGGCCTACTACAAATGCACAACTGCTGGGTGTTCTGTAAAGAAGCACGTGGAACGTGATTCGCGCAACCAAAAAAATTTGATTAGTACTTATGAGGGAAGACACAATCATGAACAACCAACCTTTAGGAACCCTAGCAAACAATATGAAGATGATGAAGATGATGAAGAAGATGAAGAAGATGAAGAACTTGCTGCTGTTGCTGCAGCCAATACCCTATTGACTTTTGGATCACCTGGGACTGTGAATTTTTTCAATACCCCAAACCTTGCAGAATCTCAAGTTCATACTCTTCAACTACTTCCTAATGACCCAAATCCTGAATTTTTCAATAGGTTCATGAGACCCAACCATTTGGGAAGTTTCAATTATAACATGAATATTGGGTCTTCCTCCTACACTCCCCGAATGCATTATTCTTCTTTCATGAATAATGCCGTTACCATGCCTTACCCTTCCTCTGGACTTAACCTTGACCACTATGCTGCCCCTCAACCTAGGCTTCCATTTCCACCACCATTCAACAGCATACCTTTTTCTTTTGGAGGCTTTTCTCAGGATTGGATGAATGCTACTTATGGGTCCAGTTCAGTGTTTCGTTTCAGAGAAACAAGAGCAAGAGATCGCAGCTGGCACTAG 1119 0.4138 MCQQSLAPELDLLHASPTKVIEQVHSSNSNDVKMLKFPFDLNAKFDEEDQISCSNEAHAKVGCSEAIQPLPSSYLEVTPEDVLPTDNDNEDRSSVVGGGSHTSQNRKRKRSVEECEKGRGKAFRRDNVEVKIKRQKENTVDDGYQWRKYGQKPIKGSVFPRAYYKCTTAGCSVKKHVERDSRNQKNLISTYEGRHNHEQPTFRNPSKQYEDDEDDEEDEEDEELAAVAAANTLLTFGSPGTVNFFNTPNLAESQVHTLQLLPNDPNPEFFNRFMRPNHLGSFNYNMNIGSSSYTPRMHYSSFMNNAVTMPYPSSGLNLDHYAAPQPRLPFPPPFNSIPFSFGGFSQDWMNATYGSSSVFRFRETRARDRSWH* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01825 372 MobiDBLite consensus disorder prediction 190 220 - -
Phac7g01825 372 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac7g01825 372 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 216 IPR044810 GO:0003700
Phac7g01825 372 FunFam WRKY transcription factor 128 201 - -
Phac7g01825 372 MobiDBLite consensus disorder prediction 79 120 - -
Phac7g01825 372 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac7g01825 372 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac7g01825 372 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac7g01825 372 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac7g01825 372 MobiDBLite consensus disorder prediction 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01825 Phac-Chr7 15783850 15791680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01825 103 203 WRKY Transcription Factor Family AT5G56270 48.039 3.45e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac7g01825 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01825 K18835 - var:108323080 491.5