Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01802 ATGGAGAGAAGCTGGGAATGGGATGATGCATGGATGATAGATACGGGTCGGGTTGAATTGAATCCGATCCAAATAAAAATATCAGATACCAGACTACTCAACCCCGAAAATCCCTTTCATTCTTTCTCTTCACCTTCGCCATCTCCCTGTGTGTCCCCTGCTTCCAGTTTCAGTGAGAGCGTAGATTCTTCTCTTCCTCCTTTTATCTTCCGCACTCCGAATCAATTGCGATACCCTCACCGGCTCCCCATTTCTGTGCCCTCAATCAGCGCGGGCAGAATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCTGACCCACCGGATGAGTGGGTGGACGGCTCGTGGACGGTGGATTGCATCTGCGGCGTGACCTTCGATGACGGCGAGGAGATGGTGAAGTGCGACGAGTGCGGCGTGTGGGTCCACACCCGCTGCTCGCGGTACGTGAAGGGCGACGACACCTTCGCCTGCGACAAGTGCAAGGCCAGGCACAACAACAATCCGGAGGAGACCGAGGTGGCGCAGTTTCTCGTGGAACTTCCCACCAAAACCATCTCCATGGACAACAAAAAGGCCCTCCCCTCTAGGCCCAGGCTCTGGACCGATAAGCCCATCCAGGACCGGGTCCACGTCCAGGGCCCACTCGGAGGTGACCCTTCCATCTTTTCCTCTCCCTCTGTCTCCTCGATTTTCTCCCCTCACCTCTGGAAGGCCTGTGGGTACGTTCCCAAGAAGTTTAATTTTCAGTACAAGGAGTTTCCCTTCTGGAGCGATAACGATGATGATAAGGATAAGGATAAGGTTAACGAGAGTTTATTACACGAACAAACACAAGCTCAACCACAGGCACCGGATAATAACAAGAATGGGGCTGGGGCTCTTGTTTATTTGTCTAAAGACGGTGATAATAATGGTTCTGCTCTTGTATTGGACCCTTCCTCTGCTGATGCGAGATCTGGACACGCCAAGGAAACTGAAACGGGCAAGTTTGGCAGCGAGGATGTGCCGCCACGTTTCCACAGTGAGGTGAAGAAGGAGAGGACTCTGCTGAGACCTCCTGTTGTTCATCACAGTAAGCGCAGCAAAGGGGATTTCGGGTCTTCAAATTCAAAAGACCGTAGCGGGAAGAAGCGGGTTAGGACTACTTCTGACAGAGAGGTGGATCCCAGGAGGAGAACTCTGCATTCTTCTAAATCAGTATTTACACCCACTGGTGAGGCGAAACAAGTGGACTTTTATGAGGACAGAGGACCAAGGATTTTAAAGGCTGACACTCGGAGCATAAAGAATAAAAACTCGAAAGAGATAGTTGTTCAAGAATGTGTTTCTGATGATTATTTGGCTGCTGATACCATCATGGAGGAGCCAAATAATAACCTAACAACTACGGAGGATTCTTCGGAACCATTATATCCTGACATGTCTAGGCATGGTGTTTCTGTTGTAGATGTACTAGCAGAAGAGAAGCCCAACCATAAACCTCCTACTGTGGTGGAGATGTCTTCTAAGACTGATGATGCCATTACATCGGCTAATAATGTTGGAAATGCTTCAGCTAAAGAAAAGGATGGGGATTGCTCAGTAGCTGATAATGCAGATGATAGTTTAGTAGTAAGAAGTGCTGCAAGTCCTCACACAGAAGGTCATTGCAGTTCTGCTCCACAGCTTGTGGATATCCAAGTTTCTCAAGATCTTGACCGCATGCGTACAAGCTCTACAAAATGCAAAGTTAAGATGAAGAGGGAAGATGACATTGATAATTTTAAGAAGCCCTCAATTTTTCATCCTTCTCCTACCAGTGATCTTAAAAACAATGAAAAACTATCTGATCACAAATCTGATGTTGTTAAAGTGAATGATGCACCAGTTCCTAGTTTACCATCATGTGAAAATAAGGTCGGAAGTGTTGACATTTCATCAGAAGTAATACCTGCTGATCATATCAATAAGCCCAATGAATTATCTGGTGATTTTTGTCCTAGAAAACAAGAACTGGAGGGTTATGAAGGTTCCTTGGAAACACAAAAGGTATTTTCTGAATCAAAAGATGGTTCAGATTCTGCTAAAGATCCATCAAAATCTGAAGCACTCGGATGTCCACCTAAAGTGCTAGCATGTGTTGGAAAGTCATCTCCAACTTCATCAACCATGAACTCCAAATCATTGGGTCATGATATCAAATCTGAAGATACTGAAACTGCTAATCCTTTTACGAAGCATGGAGTGATGACTGATTGTAGTGTTCAGATAAAGAATGAAAATTGTATAAGTAATGTTGCCAGGGATGAAAATCCAAAGAAGTCTGTTAGAGAGCGGCCAAAATCCTCCTTGAATTCCAATTCAAAGGGATTGCATTCAAGCAGGAGTGTGCATAATTCTGTCCCCAAGCAAGCGAGTTCAGATCCGAGAGATTCTGTTCCTGTATCTTCTTCTAAGTCTTTGATACATCAGACTGCAAGTATATTAGGCTCTAGTGAGTCCAATGCAGTGCACAATCAGAAGGTTCTACAAGTGCAGAATAAGATTTCATCTTCAGCACCACAGAAAGTTGAAAAACTTAACCAAACAAACACCGCCACTTCCTCTAAGTTGAACCAAGGTCATGTGCCGTCAGTGAATCCTTCTCCAATATCAAATTCTTCAATGTTAAGTGATGAAGAGCTCGCTCTGCTATTGCACCAAGAACTGAATAGTTCACCCCGTGTACCTCGAGTACCACGAGCACGCCATGCAGGTAGCTTGCCCCAGCTGAGTTCTGCTAGTCCTACGAGCATGCTAATGAAGCGTACATCGGGTGGAGGAAAGGATCACTATTTGGTATCTAGACGGAAACACAAGGATGCATCTAGAGATGGGTCTGGAAGTTCTCGTGAACCGGAAGATGAAGCTAAAAAGATAGAGAAGGAGAAGGGTCCATCCTCTTCTGATCAGAGGAAACAAGATATGTCATATATGGAAGATGCTCCTGCAAGGGAAGAAGGCCTTGCATCTGTGACAGCAGCAAACTCCATCACAAACAACACGGTTTCTTCCAATTCTGCAATTGCAAACAGTGACCCATCCTCTCCTCCCGGGGATCAGAATCTATCATCTATGCGTAACTCACCTAGGAATATCTCTGATGATGATACAGCGACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGAAATTATTATTATGAGCAAAGGCAGGCGCATGACGTATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAACACAATGGTGAGCGATATGCATACTCAAGTCACTCCCAGGCTGTTCTTGATTGTTTGAGGAACCGGCAAGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGAAAAAGGCGTAAGCTGGAGGCTGAAGAATCTGATGATAATGGATATGGCAAGGGAAGAACTGCGAAAGAGGCTGAAGGGAAGAACTTTGAGTTGCAAAAGGAAGAGTTCCCCAAAGGCAAGCGTAAAGCTCGAAAACGTAGACGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTGAGGAGGAGACAAAAAGCTGACTCCCTAACGGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGCCCAGCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTAA 3714 0.4583 MERSWEWDDAWMIDTGRVELNPIQIKISDTRLLNPENPFHSFSSPSPSPCVSPASSFSESVDSSLPPFIFRTPNQLRYPHRLPISVPSISAGRMKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNNNPEETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPIQDRVHVQGPLGGDPSIFSSPSVSSIFSPHLWKACGYVPKKFNFQYKEFPFWSDNDDDKDKDKVNESLLHEQTQAQPQAPDNNKNGAGALVYLSKDGDNNGSALVLDPSSADARSGHAKETETGKFGSEDVPPRFHSEVKKERTLLRPPVVHHSKRSKGDFGSSNSKDRSGKKRVRTTSDREVDPRRRTLHSSKSVFTPTGEAKQVDFYEDRGPRILKADTRSIKNKNSKEIVVQECVSDDYLAADTIMEEPNNNLTTTEDSSEPLYPDMSRHGVSVVDVLAEEKPNHKPPTVVEMSSKTDDAITSANNVGNASAKEKDGDCSVADNADDSLVVRSAASPHTEGHCSSAPQLVDIQVSQDLDRMRTSSTKCKVKMKREDDIDNFKKPSIFHPSPTSDLKNNEKLSDHKSDVVKVNDAPVPSLPSCENKVGSVDISSEVIPADHINKPNELSGDFCPRKQELEGYEGSLETQKVFSESKDGSDSAKDPSKSEALGCPPKVLACVGKSSPTSSTMNSKSLGHDIKSEDTETANPFTKHGVMTDCSVQIKNENCISNVARDENPKKSVRERPKSSLNSNSKGLHSSRSVHNSVPKQASSDPRDSVPVSSSKSLIHQTASILGSSESNAVHNQKVLQVQNKISSSAPQKVEKLNQTNTATSSKLNQGHVPSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLSSASPTSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSREPEDEAKKIEKEKGPSSSDQRKQDMSYMEDAPAREEGLASVTAANSITNNTVSSNSAIANSDPSSPPGDQNLSSMRNSPRNISDDDTATAGRPVHRTLPGLINEIIIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRQEWARLVDRGPKTNSNRKRRKLEAEESDDNGYGKGRTAKEAEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01802 1237 MobiDBLite consensus disorder prediction 709 723 - -
Phac7g01802 1237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 169 IPR013083 -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1119 1167 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 589 611 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1011 1043 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1011 1053 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1181 1198 - -
Phac7g01802 1237 SMART PHD_3 119 162 IPR001965 -
Phac7g01802 1237 ProSitePatterns Zinc finger PHD-type signature. 120 161 IPR019786 -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 758 813 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 277 397 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 670 740 - -
Phac7g01802 1237 PANTHER UNCHARACTERIZED 94 1229 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 936 989 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1201 1215 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 88 110 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 318 396 - -
Phac7g01802 1237 SUPERFAMILY FYVE/PHD zinc finger 108 166 IPR011011 -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 1119 1237 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 915 929 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 901 995 - -
Phac7g01802 1237 MobiDBLite consensus disorder prediction 775 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01802 Phac-Chr7 15372889 15387993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01802 118 161 PHD Transcription Factor Family AT5G22260 44.681 3.44e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01802 - - gmx:100799209 1762.66